Shrimp white spot syndrome virus

Nucleocytoviricota Arthropoda extended

PX667114

Genome And Source

Length
17,609
Type
dsDNA
GC%
41.3%
Completeness
unknown
Country
N/A
Year
N/A

📋 Data Provenance

🗄️
Source
GenBank / NCBI
🔗
Accession
PX667114
📁
Entry Type
partial_genome
🕒
Last Updated
N/A

Genome Browser

No ORF position data available for this genome.

Curation Status

2
Isolates
2
Hosts
1
Proteins
Sequence

Related Viruses

No related viruses found.

Reference

Direct Submission

Qi,Y.

Submitted (19-APR-2025) Institute of Plant Virology, Ningbo University, 818 Fenghua Road, Jiangbei District, Ningbo, Zhejiang 315211, China 2025

ICTV Mapping

Whispovirus lacteolymphae
Nimaviridae / Whispovirus
auto_matched · high

Reviewed Evidence

Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.

Virulence / pathogenicity

Pathogenicity terms found: lethal
pathogenicity · medium
Pathogenicity terms found: pathogenicity
pathogenicity · medium
Pathogenicity: virulence
pathogenicity · medium
The emergence and global spread of Severe-Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), responsible for the COVID-19 pandemic, poses an overwhelming challenge to health policies worldwide.
pathogenicity · medium
Finally, nanovaccine efficacy was tested in a lethal WSSV challenge model in vivo in shrimp.
pathogenicity · medium
There was minimal (n = 7) overlap in the differentially expressed miRNAs detected in shrimp and crabs in response to WSSV challenge.
pathogenicity · medium
The shrimp were fed with antibody added to the shrimp diet (10 µg of respective antibody per gram of feed (equivalent to 8% bodyweight/day)) every day for three days prior to the challenge test.
pathogenicity · medium
Case and control farms were detected as below: (1) Cases shrimp farms met two requests: (a) Had at least one pond that was positive for AHPND based on real-time PCR and (b) had tiger shrimps or white leg shrimps in at least one pond, showing at least
pathogenicity · medium
When working with archival DFPE shrimp tissue, there is an additional challenge because shrimp tissues are fixed in Davidson’s fixative instead of formalin.
pathogenicity · medium
With the lack of immortal shrimp cell lines, disease challenges can be used to identify pathogenic agents infecting M.
pathogenicity · medium

Temperature

Proteomic analysis of muscle between hybrid abalone andparental lines Haliotis gigantea Reeve and Haliotis discus hannai Ino A proteomic study on postdiapaused embryonic development of brine shrimp (Artemia franciscana) Proteomic Comparison between T
temperature · medium
These results imply that the cellular immune system of shrimp, particularly phagocytosis, is capable of a degree of specificity and shows the phenomenon of ‘immune priming’ reported by other workers.
temperature · medium
Prior to experimental challenges, naïve Pacific whiteleg shrimp Penaeus vannamei (2–5g fresh weight) were purchased from local SPF shrimp broodstock producers and acclimated in the laboratory for 2 days in 20 L artificial seawater (Marinium) at 20 pp
temperature · medium
Defense parameters Long‐term trends in oyster population dynamics in Delaware Bay: regime shifts and response to disease Susceptibility of testicular cell cultures of crab, Scylla serrata (Forskal) to white spot syndrome virus Research priorities for
temperature · medium
In this study, using a highly controlled gnotobiotic brine shrimp model system, we aimed to investigate whether phloroglucinol potentiates the generation of prooxidant activity and heat shock protein 70 (Hsp70) production in vivo and whether this put
temperature · medium
Impact of pig slurry treatment on reduction of the viral load and prevalence of the virus in food substrates High prevalence of hepatitis E virus infection in goats Two-year systematic study to assess norovirus contamination in oysters from commercia
temperature · medium
qPCR analysis of the distribution of NdTryp in different tissues and during shrimp ontogenesis The melt curve analysis revealed a single peak for the NdTryp gene, indicating the qPCR product has a high degree of specific amplification.
temperature · medium
Combined effects of temperature and salinity on critical thermal min- ima of pacific white shrimp Litopenaeus vannamei (Crustacea: Penaeidae).
temperature · medium
Several shrimp immune-related genes in the groups of heat shock proteins/chaperones, cytokines, blood clotting system, proteinase and proteinase inhibitors, homeostasis/apoptosis, proPO system, oxidative stress, RNAi pathway, antimicrobial peptide
temperature · medium
Conventional White Shrimp Challenge Test Before the challenge test, healthy white shrimp (Penaeus vannamei; 4.6 ± 0.48 g) were transferred to 50 L seawater in plastic tanks, and were acclimated for one week under the following conditions: 30 shrimp/t
temperature · medium

Diagnostic And Control Records

No curated diagnostic or control records are available for this virus.

Proteins

🧬

No protein annotations available

Related Literature (1550 articles)

Taura syndrome virus from Penaeus vannamei shrimp cultured in Korea
Do,J.W., Cha,S.J. and Park,J.W.
unknown
DOI
Clinical emergence of a novel sequence type (ST3672) NDM-1-producing
Ni C, Wang J, Yang C, Gao S, Xu Z, Wang Y, Peng H, Cao W, Han Y
2026
Synergistic Effects of Shewanella algae A3 and Serratia marcescens Van80 UB3 on Immune Response, Gene Expression and Resistance to Vibrio parahaemolyticus Vp5 in Pacific White Shrimp.
Sutanti S, Sukenda S, Widanarni W, Alimuddin A, Aliah RS, Widantara H, Hidayatullah D
2026
lncRNA-803 Suppresses Apoptosis in DF-1 Cells via the miR-6555-3p/MDM4/p53 Axis.
Han S, Yang J, Qiu Y, Zhao S, Jiang Y, Han L, Han L
2026
Biological Functions of Silver Nanowires in Inhibiting
Sahoo SR, Liao ZH, Nan FH
2026
Direct LAMP for on-site rapid detection of Vibrio parahaemolyticus in shrimp (Litopenaeus vannamei) aquaculture water.
Pu X, Lu F, Yang Q, Han Z, Zhu X, Chen J, Zhang D, Zhang X
2026
Effects of Dietary Yeast Nucleic Acids and Free Nucleotides on Growth Performance, Digestive Enzyme Activities, Immune Parameters, Tolerant to Hypoxic Stress and Disease Resistance in Juvenile Pacific White Shrimp (Litopenaeus vannamei).
Ratanaprapaporn T, Keetanon A, Chongprachavat N, Poldetch P, Borba MG, Lissoni S, Rairat T, Chuchird N
2026
Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing.
Florea A, Wade N, Salisbury SJ, Furniss J, Fraslin C, Chapuis A, Sullivan K, Stewart R, Robledo D, Bean TP
2026
Insect SVWC Proteins: A Diverse Cytokine-like Family Orchestrating Multilayered Antiviral and Antibacterial Immunity.
Chen Y, Xu G, Wang J, Zhang C, Abubakar AY, Xia H
2026
Carvacrol as a one health-relevant antimicrobial agent: mechanistic insights on its impact on gnotobiotic Artemia and Vibrio campbellii interactions.
Baruah K, Debnath D, Patabandi PPSK, Bossier P, Yang Q, Defoirdt T, Norouzitallab P
2026
Transposon mutant library reveals the complex regulatory network of biofilm formation in
Yuan S, Wang W, Yin H, Luu QH, Kong L, Zhang X, Lu S, Bai X, Han X, Jiang W
2026
Influence of the two-component system PhoBR associated with phosphate-sensing capacity on the virulence mechanism of Vibrio alginolyticus.
Chen Y, Zhang Z, Xu X, Chen J, Zhang L, Wu C, Xiao Y, Sha Y, Guo M
2026
Untitled
Dinh TTH, Nguyen QP, Bui TT, Nguyen KN
2026
Whole genome and phylogenomic insights into Vibrio parahaemolyticus from Pacific White Shrimp reveal resistance and virulence traits in Bangladeshi aquaculture.
Masum MHU, Uddin MS, Chamonara K, Sultana S, Islam S, Siddiqua A
2026
De novo transcriptome assembly and annotation of Penaeus monodon hemocytes under WSSV infection and STAT knockdown.
Jatuyosporn T, Laohawutthichai P, Cornejo-Granados F, Gallardo-Becerra L, Tassanakajon A, Hurtado-Ramírez JM, Ochoa-Leyva A, Krusong K
2026
Microbial decomposer diversity and metabolic function during the decomposition of brine shrimp carcasses in a saline lake.
Gao L, Fang BZ, Yang J, Lian ZH, Chen Y, Mohamad OAA, Xu QY, Liu YH, Wu D, Yuan Y, Abdugheni R, Li MM, Wang P, Ortúzar M, Li XY, Huang JR, Liu L, Jiang HC, Shu W, Hedlund BP, Li WJ, Jiao JY
2026
Dietary lipid levels modulate enrofloxacin-induced antibiotic resistance and metabolic dysfunction in Pacific white shrimp (Litopenaeus vannamei): assessing the dietary risk and metabolic impact in edible tissues.
Song J, Liu Y, Pan Y, Qu K, Huang B, Chen X, Ma Y, Li Y, Chen J, Chi S, Tan B, Xie S
2026
Native
Pazmiño-Gomez B, Rodas-Pazmiño K, Pazmiño-Pérez R, Tapia-Guijarro T, Balcazar-Quimi W, Valle-Asan S, Salazar-Vera S, Villalva-Vera M, Ochoa-Fajardo D, Rodas-Neira E
2026
Dietary luteolin supplementation enhances growth performance, digestive capacity, and immune-antioxidant status of whiteleg shrimp (Litopenaeus vannamei) against Vibrio parahaemolyticus infection.
Mathew RT, Ashour M, Alkhamis YA, Mansour AT, Haroun M, Almohaimeed HM, Bushnaq A, Abdul Kari Z, Eissa MEH, Eissa EH
2026
Hemocyanin regulates phosphatidylcholine metabolism to enhance reactive oxygen species-mediated immunity in Pacific white shrimp (Penaeus vannamei).
Shi Y, Kong YH, Bao S, Zhou Y, Cheng J, Zheng Z, Zhao Y, Zhao X, Zhang Y
2026
A lightweight deep learning architecture for automatic shrimp disease classification.
Sharma S, Rumahorbo PS, Kondo S, Watanabe S, Okada Y, Gautam BP, Sato K
2026
Multilocus sequence typing of antimicrobial-resistant zoonotic bacteria from shrimp aquaculture environments in Selangor, Malaysia.
Devadas S, Zakaria Z, Mohamed Din MS, Bhassu S, Abd Karim MM, Ikhsan N
2026
Screening of proteins interacting with vhvp-2 protein from Vibrio parahaemolyticus causing translucent post-larvae disease in Pacific white shrimp Litopenaeus vannamei.
An N, Jiang L, Wang Y, Du Z, Wei Y, Zeng Q, Wang M
2026
[A case of cerebellar-limited HIV-associated progressive multifocal leukoencephalopathy diagnosed with the aid of the shrimp sign].
Ojio H, Kuroda T, Nohara T, Matsuoka K, Wada T, Murakami H
2026
Genomic and phylogenomic exploration of Vibrio cholerae strain SU129B isolated from Penaeus vannamei: Resistance, virulence, and evolutionary dynamics in bangladeshi aquaculture.
Uddin MS, Chamonara K, Masum MHU, Siddiqua A, Hossain I, Sultana S, Islam S
2026
Amarilloviruses of Aquatic Animals.
Kibenge F, Kibenge M, Vargas D, Godoy M
2026
Genomic and phenotypic characterization of Vibrio cholerae strain SU109: a genomic investigation of a shrimp-associated strain from Bangladesh.
Chamonara K, Masum MHU, Uddin MS, Siddiqua A, Sultana S, Islam S
2026
Assessment of the Incidence of Vibrio spp. in Shrimp Farms Relative to Water Parameters and Their Molecular Detection in the Southwest Coastal Region of Bangladesh.
Sohidullah M, Matubber B, Rahman MH, Sayeed A, Rahman S, Yesmin L, Hossain MJ, Chowdhury MI, Alam MA
2026
Development and a TaqMan probe-based qPCR assay for Vibrio parahaemolyticus causing translucent post-larvae disease (TPD) detection in Litopenaeus vannamei.
Jia X, Zhang L, Li Q, Zeng Q, Hu J, Bao Z, Wang M
2026
The crosstalk between acute hepatopancreatic necrosis disease (AHPND) and the Vibrio quorum sensing (QS) system: A review.
Wang HC, Kumar R, Ayenero ME, Hsu KC, Lo CF, Lin SJ, Wang HC
2026
Dietary incorporation of gut-derived probiotics from fast-growing white shrimp, Penaeus vannamei to boost growth and health performance in white shrimp.
Cheng AC, Chaemlek P, Pichitkul P, Liu CH
2026
Crustacean Mab21 proteins drive tissue-specific antiviral immunity by activating IKKε outside the canonical nucleic-acid sensing paradigm.
Li H, Li Q, Yang H, Wang X, Lv A, Di X, Wang R, Wang S, Yin B, He J, Li C
2026
Physiological and biochemical characterization of trypsin from Neocaridina denticulata sinensis and its roles in ontogenesis and immune response.
Feng D, Song Y, Wu Z, Liu W, Pu Y, Gao Y, Sun Y, Zhang J
2026
Genomic insights into Brevibacterium sediminis strain IMA_C3 isolated from an integrated mangrove aquaculture pond.
Yash, Ghosh A, Dey A, Sinha M, Bera N, Chakraborty S, Bhadury P
2026
Single-cell transcriptomics of Pacific white shrimp (
Aldersey JE, Abernathy JW, Lange MD, García JC, Shoemaker CA, Beck BH
2026
In-water Pediococcus acidilactici species probiotic improved water quality, immunity, and disease resistance against Vibrio parahaemolyticus in Pacific white shrimp.
Said RM, Hendam BM, Abd Al-Kareem OM, Mahmoud NMS, Osailan R, Younis NA, Mansour YA, Aly MYM, El Araby RES
2026
Inhibition mechanism of linalool on Vibrio parahaemolyticus biofilms and its removal of biofilms on the surfaces of shrimp and its processing materials.
Zhao Z, Chen H, Chen W, Zhang M, Pei J, Lyu Y, He R, Chen W
2026
Identification of Genes Associated with the Pan-Vibrios Resistance (PVR) Trait of Pacific White Shrimp (
Wen S, Cheng C, Yin J, Lv Y, Zhang X, Ma B, Liu Y, Qiu Y, He H, Luo P, Yuan L
2026
Genome-based characterization of AHPND and non-AHPND
Lee SY, Choi HJ, Lee S, Choi J, Kwak JS, Kang YJ, Hong SC
2026
CRISPR/Cas12a empowered electrochemical biosensor for ultrasensitive detection of Vibrio parahaemolyticus in seafood samples.
Li Y, Chen X, Yang Z, Wang Z, Wang R
2026
Exploring physicochemical property and food safety in dried shrimp production: Risks and mitigation strategies.
Fitriana F, Anuntawirun S, Roongrojmongkhon N, Dachsri P, Atwill ER, Thiptara A, Jeamsripong S
2026
A visual protocol for sensitive
Wang J, Cui Q, Zeng S, Fu D, Peng D, Chen F, Wan Y, Wang A
2026
AlphaFold modeling of the white spot syndrome virus polymerase.
Skern T, Oakey J
2026
White spot syndrome virus IE1 protein hijacks the host pentose phosphate pathway to fuel viral replication.
Zhang J, Lu K, Zhu J, Aweya JJ, Zhang Y, Yao D
2026
Onnamides A and B Suppress Hepatitis B Virus Transcription by Inhibiting Viral Promoter Activity.
Hayashi Y, Arizono S, Higa N, Tyas TA, Akahori Y, Maeda K, Toyama M, Mori-Yasumoto K, Yasumoto-Hirose M, Miyakawa K, Tanaka J, Jomori T
2026
Effect of the antimicrobial peptide BmKn2-7 in inhibiting Vibrio parahaemolyticus and its role in improving microbiota, immunity and Vibrio resistance in Litopenaeus vannamei.
Liang Q, Wang Q, Chi P, Fan D, Tan B, Xie S, Deng J, Liu H, Zeng L
2026
Combined Vibrio and nanoplastics stress promotes nanoplastic accumulation while reducing bacterial lethality in shrimp.
Zhong R, Fang X, Li C, Zheng B, Zhang G, Gong H, Yan M
2026
Integrated multi-omics analyses reveals physiological and gut microbiota responses of Litopenaeus vannamei to graded levels of dietary bile acids.
Tan P, Zhang L, Zhang J, Cao A, Xu D, Zhu A, Ding Z, Shao Q
2026
Shelf-Life Extension of Steam-Cooked Harpiosquillid Mantis Shrimp Meat Using High Voltage Cold Plasma and Chitooligosaccharide-Catechin Conjugate During Refrigerated Storage.
Chanchi Prashanthkumar M, Palamae S, Saetang J, Zhang B, Benjakul S
2026
Effects of short-term exposure to ferrous sulfate on bioaccumulation, oxidative stress biomarkers, immunity, and intestinal microbiota in Litopenaeus vannamei.
Derrick A, Zheng Y, Fred B, Boateng AG, Wang H, Mrope P, Azupio S, Zhang S
2026

Geographic Distribution

India 1 isolates

Taxonomy Information

Family
Nucleocytoviricota
Host Phylum
Arthropoda
Genome Type
dsDNA
Discovery Method
metagenomic_survey

ICTV Classification Mapping

Whispovirus lacteolymphae
Nimaviridae / Whispovirus
high

Related Isolates

Accession Length GC Completeness Country Year
PV030922 2,045 38.6 unknown India N/A
PX667114 17,609 41.3 unknown N/A N/A

Sequence

Loading sequence...