PV550974
Picornaviridae相关病毒
Genome And Source
Length
9,596
Type
ssRNA(+)
GC%
42.2%
Completeness
unknown
Country
China
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
1
Hosts
1
Proteins
✓
Sequence
Related Viruses
No related viruses found.
Reference
Direct Submission
Qi,Y.
Submitted (19-APR-2025) Institute of Plant Virology, Ningbo University, 818 Fenghua Road, Jiangbei District, Ningbo, Zhejiang 315211, China 2025
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Aalivirus apekidu (Aalivirus)
- Ailurivirus agiapa (Ailurivirus)
- Ampivirus apilisi (Ampivirus)
- Anativirus aductai (Anativirus)
- Anativirus biphaco (Anativirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Auto-extracted: mortality in 'A cytokine receptor domeless restrains mud crab reovirus infection via JAK-STAT signaling pathway in mud crab (Scylla paramamosain).'
mortality · medium
Auto-extracted: pathogenicity in 'Identification, genome sequencing, and virulence variation analysis of MCRV-NH, an epidemic reovirus strain in cultured mud crab, Scylla paramamosain'
pathogenicity · medium
Auto-extracted: mortality in 'Identification, genome sequencing, and virulence variation analysis of MCRV-NH, an epidemic reovirus strain in cultured mud crab, Scylla paramamosain'
mortality · medium
Poornima
123
Table 1 Discovery of viruses in humans, terrestrial and marine animals, plants and insects and understanding viral ecology using metagenomics
Objective
Finding
Reference
Discovery of viruses in human diseases
To develop a method for vir
Viruses are abundant biological entities on earth and the emergence of viral pathogens has become a serious threat to aquaculture and fisheries worldwide.
pathogenicity · medium
Pathogenicity of a baculovirus infection causing white spot syndrome in cultured penaeid shrimps in Taiwan A nonoccluded, systemic baculovirus that occurs in cells of ectodermal and mesodermal origin and causes high mortality in the black tiger prawn
pathogenicity · medium
paramamosain at different times post-challenge.
pathogenicity · medium
paramamosain were divided into test and control
groups for challenge with WSSV at 5 incremental, biweekly doses starting from 1 × 104 and ending at 5 × 106
copies/g.
pathogenicity · medium
Identification and functional analysis of transforming growth factor-β type I receptor (TβR1) from Scylla paramamosain: The first evidence of TβR1 involved in development and innate immunity in crustaceans.
pathogenicity · high
Temperature
In fact, phylogenetic analyses
of the 5NCR of picornavirus reveal extensive structure-con-
serving substitutions within predicted stems, a high degree of
sequence conservation in predicted loops, and clustering of
regions with sequence divergence in
temperature · medium
Defense parameters Long‐term trends in oyster population dynamics in Delaware Bay: regime shifts and response to disease Susceptibility of testicular cell cultures of crab, Scylla serrata (Forskal) to white spot syndrome virus Research priorities for
temperature · medium
Hosts
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (160 articles)
Complete genome sequencing and analysis of the mud crab dicistrovirus
Guo,Z.-X., He,J.-G. and Weng,S.-P.
unknown
Genome-wide Characterization of Non-shared Sequences among Amphora-shaped Giant Viruses.
Akashi M, Takemura M, Suzuki S.
2026
Shellfish as a Potential Source of Hepatitis E Virus: Epidemiological Evidence, Biological Plausibility, and Research Gaps.
Okamoto H
2026
The Regulatory Effect and Molecular Mechanism of the Anti-Lipopolysaccharide Factor-like Gene on the Resistance of Shrimp (
Yang B, Zhang L, Fu F, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Xing Q, Li X, Meng X
2025
Integrin β Regulates the Hepatopancreas Antiviral Innate Immune System by Affecting the Expression of Antimicrobial Peptides in
Yang B, Zhang L, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Li X, Meng X
2025
A Metagenomic Survey of Virological Hazards in Market-Ready Oysters.
Dirks RAM, Sosef NP, Zwartkruis-Nahuis JTM, Thijssen MMA, Jansen CCC, Boxman ILA
2025
Direct Submission
Qi,Y.
2025
A cytokine receptor domeless restrains mud crab reovirus infection via JAK-STAT signaling pathway in mud crab (Scylla paramamosain).
Deng H, Ke Y, Weng S, Hu L, Zhang W, Sun Y, Yang L, Wang X, Feng M, Guo W, Zhong Z, Zhang D, He J, Zhou Y.
2025
RNA virus diversity highlights the potential biosecurity threat posed by Antarctic krill
Tingting Xu; Xianyong Zhao; Thomas P. Loch; Jiancheng Zhu; Wei Wang; Xinliang Wang; Chong Wang; Gangzhou Fan
2025
Combating White Spot Syndrome Virus (WSSV) in Global Shrimp Farming: Unraveling Its Biology, Pathology, and Control Strategies.
Iftehimul M, Hasan NA, Bass D, Bashar A, Haque MM, Santi M.
2025
Giant RNA genomes: Roles of host, translation elongation, genome architecture, and proteome in nidoviruses
Neuman BW; Smart A; Gilmer O; Smyth RP; Vaas J; Böker N; Samborskiy DV; Bartenschlager R; Seitz S; Gorbalenya AE; Caliskan N; Lauber C
2025
Comparative transcriptomic and molecular biology analyses to explore potential immune responses to
Chen D, Xin Y, Teng J, Zhao X, Lu J, Li Y, Wang H
2024
Effects of dietary probiotic (
Yang W, Liang H, Chen R, Du Z, Deng T, Zheng Y, Song Y, Duan Y, Lin J, Bakky MAH, Tran NT, Zhang M, Li S
2024
Viral metagenomic investigation of two Caribbean echinoderms,
Hewson I, Brandt M, Budd K, Breitbart M, DeRito C, Gittens S, Henson MW, Hylkema A, Sevier M, Souza M, Vilanova-Cuevas B, Von Hoene S
2024
Exosome-mediated viral nucleic acid presentation in a crustacean expounds innate immunity from a novel perspective.
Gong Y, Hu H, Zhao X, Wei W, Zhang M, Tran NT, Ma H, Zhang Y, Chan K-G, Li S
2024
A Chromosome-level genome assembly of giant river prawn (Macrobrachium rosenbergii).
Zheng Y, Guo G, Lv Y, Gao Q, Zhou D, Zhang L, Tu G, Weng S, Li C, He J, Wang M
2024
circRNA_8521 promotes Senecavirus A infection by sponging miRNA-324 to regulate LC3A.
Yang X, Liu R, Du Y, Mei C, Zhang G, Wang C, Yang Y, Xu Z, Li W, Liu X
2024
Characteristics and pathogenicity of Vibrio alginolyticus SWS causing high mortality in mud crab (Scylla serrata) aquaculture in Hong Kong.
Kwok CT, Yu RC, Hau PT, Cheung KY, Ng IC, Fung J, Wong IT, Yau MC, Liu WM, Kong HK, Siu GK, Chow FW, Seto SW.
2024
A novel C-type lectin (SpccCTL) suppresses MCRV replication by binding viral protein and regulating antiviral peptides in Scylla paramamosain.
Yang QF, Li S, Feng GP, Qin C, Min XW, Fang WH, Wu Y, Zhou J, Li XC
2023
A metagenomic comparison of clearwater, probiotic, and Rapid BFT
Waiho K, Abd Razak MS, Abdul Rahman MZ, Zaid Z, Ikhwanuddin M, Fazhan H, Shu-Chien AC, Lau NS, Azmie G, Ishak AN, Syahnon M, Kasan NA
2023
The structure and mechanism of action of a distinct class of dicistrovirus intergenic region IRESs.
Abaeva IS, Young C, Warsaba R, Khan N, Tran LV, Jan E, Pestova TV, Hellen CUT
2023
Virome Analysis Provides an Insight into the Viral Community of Chinese Mitten Crab
Guo G, Wang M, Zhou D, He X, Han P, Chen G, Zeng J, Liu Z, Wu Y, Weng S, He J
2023
Identification and characterization of mitogen-activated protein kinase kinase 4 (MKK4) from the mud crab Scylla paramamosain in response to Vibrio alginolyticus and White Spot Syndrome Virus (WSSV).
Lin CY, Zhang YM, Li BZ, Shu MA, Xu WB
2023
SpTNF regulates apoptosis and antimicrobial peptide synthesis in mud crab (Scylla paramamosain) during white spot syndrome virus infection.
Tran NT, Chen L, Zhou Y, Zhang M, Wang Y, Li S
2023
Inactivated ostreid herpesvirus-1 induces an innate immune response in the Pacific oyster,
Delisle L, Rolton A, Vignier J
2023
In silico screening of chalcones and flavonoids as potential inhibitors against yellow head virus 3C-like protease.
Boonthaworn K, Hengphasatporn K, Shigeta Y, Chavasiri W, Rungrotmongkol T, Ounjai P
2023
The structure of a 12-segmented dsRNA reovirus: New insights into capsid stabilization and organization.
Zhang Q, Gao Y, Baker ML, Liu S, Jia X, Xu H, He J, Kaelber JT, Weng S, Jiang W
2023
Viruses of a key coral symbiont exhibit temperature-driven productivity across a reefscape.
Howe-Kerr LI, Grupstra CGB, Rabbitt KM, Conetta D, Coy SR, Klinges JG, Maher RL, McConnell KM, Meiling SS, Messyasz A, Schmeltzer ER, Seabrook S, Sims JA, Veglia AJ, Thurber AR, Thurber RLV, Correa AMS
2023
Limited cross-species virus transmission in a spatially restricted coral reef fish community.
Costa VA, Bellwood DR, Mifsud JCO, Van Brussel K, Geoghegan JL, Holmes EC, Harvey E
2023
Effects of Hizikia fusiforme polysaccharides on innate immunity and disease resistance of the mud crab Scylla paramamosain.
Jin QR, Mao JW, Zhu F
2023
White spot syndrome virus impact on the expression of immune genes and gut microbiome of black tiger shrimp Penaeus monodon.
Jatuyosporn T, Laohawutthichai P, Romo JPO, Gallardo-Becerra L, Lopez FS, Tassanakajon A, Ochoa-Leyva A, Krusong K
2023
A novel virus in the family Marnaviridae as a potential pathogen of Penaeus vannamei glass post-larvae disease.
Xu A, Xu S, Tu Q, Qiao H, Lin W, Li J, He Y, Xie T, Pan L, Pan Q, Zhao Y, Su X, Tong Y.
2023
Identification, genome sequencing, and virulence variation analysis of MCRV-NH, an epidemic reovirus strain in cultured mud crab, Scylla paramamosain
Chu X, Zhang B, Fang WH, Feng GP, Wang W, Zhou S, Wang Y, Li X, Li XC.
2023
Transmission Routes and a New Freshwater Crustacean Host for Infectious Precocity Virus (IPV)
Wenyan Xu; Caiyuan Zhao; Xiaoyi Pan; Xinyi He; Xiaoli Liu; Jianan Hou; Jianhu Pang
2023
Viruses of Freshwater Mussels during Mass Mortality Events in Oregon and Washington, USA.
Richard Jordan C; Blevins Emilie; Dunn Christopher D; Leis Eric M; Goldberg Tony L
2023
Untitled
Wang Y, Yang LG, Feng GP, Yao ZL, Li SH, Zhou JF, Fang WH, Chen YH, Li XC
2022
Metagenomic Assessment of DNA Viral Diversity in Freshwater Sponges,
Butina TV, Petrushin IS, Khanaev IV, Bukin YS
2022
Virome Analysis of Normal and Growth Retardation Disease-Affected Macrobrachium rosenbergii.
Zhou D, Liu S, Guo G, He X, Xing C, Miao Q, Chen G, Chen X, Yan H, Zeng J, Zheng Z, Deng H, Weng S, He J
2022
Deciphering the virulent Vibrio harveyi causing spoilage in muscle of aquatic crustacean Litopenaeus vannamei.
Gan L, Zheng J, Xu WH, Lin J, Liu J, Zhang Y, Wu Z, Lv Z, Jia Y, Guo Q, Chen S, Liu C, Defoirdt T, Qin Q, Liu Y
2022
Identification and function analysis of two fibroblast growth factor receptor (FGFR) from Scylla paramamosain: The evidence of FGFR involved in innate immunity in crustacean.
Li BW, Xu WB, Dong WR, Zhang YM, Cheng YX, Chen DY, Xiao Y, Chen YY, Shu MA
2022
Detection of Human and Fish Viruses in Marine Gastropods.
Errani F, Ciulli S, Mandrioli L, Serratore P, Volpe E
2022
Biochemical, metabolic, and immune responses of mud crab (Scylla paramamosain) after mud crab reovirus infection.
Cheng C, Ma H, Liu G, Deng Y, Jiang J, Feng J, Guo Z
2022
SpBNIP3 regulates apoptosis and autophagy in mud crab (Scylla paramamosain) during white spot syndrome virus infection.
Tran NT, Zhou Y, Chen L, Sun Z, Li S
2022
Complementary Effects of Virus Population Are Required for Efficient Virus Infection.
Sun Y, Zhang Y, Zhang X
2022
Role of Cellular Receptors in the Innate Immune System of Crustaceans in Response to White Spot Syndrome Virus.
Tran NT, Liang H, Zhang M, Bakky MAH, Zhang Y, Li S
2022
SpBAG3 assisted WSSV infection in mud crab (Scylla paramamosain) by inhibiting apoptosis.
Liu T, Lin S, Du Y, Gong Y, Li S
2022
Loading additional literature...
Geographic Distribution
China
1 isolates
Taxonomy Information
Family
Picornaviridae
Host Phylum
Arthropoda
Genome Type
ssRNA(+)
Discovery Method
metagenomic_with_host_evidence
Related Isolates
| Accession | Length | GC | Completeness | Country | Year |
|---|---|---|---|---|---|
| PV550974 | 9,596 | 42.2 | unknown | China | N/A |
Sequence
Loading sequence...