PP215318
Tombusviridae相关病毒
Genome And Source
Length
4,800
Type
ssRNA(+)
GC%
55.8%
Completeness
unknown
Country
China
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
1
Hosts
1
Proteins
✓
Sequence
Related Viruses
No related viruses found.
Reference
Enormous diversity and cross-species transmission of RNA viruses in economic crustaceans
Dong,X., Meng,F., Zhou,C., Li,J., Hu,T., Wang,Y., Wang,G., Luo,J., Liu,S., Huang,J. and Shi,W.
Unpublished unknown
DOI: 10.1128/msystems.01016-24
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Alphacarmovirus adonis (Alphacarmovirus)
- Alphacarmovirus angeloniae (Alphacarmovirus)
- Alphacarmovirus cacti (Alphacarmovirus)
- Alphacarmovirus calibrachoae (Alphacarmovirus)
- Alphacarmovirus dianthi (Alphacarmovirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Proteomic analysis of muscle between hybrid abalone andparental lines Haliotis gigantea Reeve and Haliotis discus hannai Ino A proteomic study on postdiapaused embryonic development of brine shrimp (Artemia franciscana) Proteomic Comparison between T
pathogenicity · medium
Temperature
Proteomic analysis of muscle between hybrid abalone andparental lines Haliotis gigantea Reeve and Haliotis discus hannai Ino A proteomic study on postdiapaused embryonic development of brine shrimp (Artemia franciscana) Proteomic Comparison between T
temperature · medium
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (61 articles)
Enormous diversity and cross-species transmission of RNA viruses in economic crustaceans
Dong,X., Meng,F., Zhou,C., Li,J., Hu,T., Wang,Y., Wang,G., Luo,J., Liu,S., Huang,J. and Shi,W.
unknown
The Regulatory Effect and Molecular Mechanism of the Anti-Lipopolysaccharide Factor-like Gene on the Resistance of Shrimp (
Yang B, Zhang L, Fu F, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Xing Q, Li X, Meng X
2025
Integrin β Regulates the Hepatopancreas Antiviral Innate Immune System by Affecting the Expression of Antimicrobial Peptides in
Yang B, Zhang L, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Li X, Meng X
2025
MAP3K15 facilitates multiple viral genes expression in crustaceans via Dorsal-CC-CL-STAT axis besides the JNK/P38 pathway.
Ran XQ, Liu CC, Xu XM, Wu XM, Kang CJ
2025
LtrA is critical for biofilm formation and colonization of Vibrio parahaemolyticus on food-related surfaces.
Xiong S, Zhang N, Sun H, Zhang M, Li X, Luo X, Zhang Y, Lu R
2025
Charting the Future: Advanced Technologies for Sustainable Parasite Control in Aquaculture.
Yang J, Bhassu S, Rajamanikam A.
2025
Comparative transcriptomic and molecular biology analyses to explore potential immune responses to
Chen D, Xin Y, Teng J, Zhao X, Lu J, Li Y, Wang H
2024
A Chromosome-level genome assembly of giant river prawn (Macrobrachium rosenbergii).
Zheng Y, Guo G, Lv Y, Gao Q, Zhou D, Zhang L, Tu G, Weng S, Li C, He J, Wang M
2024
Virome Analysis Provides an Insight into the Viral Community of Chinese Mitten Crab
Guo G, Wang M, Zhou D, He X, Han P, Chen G, Zeng J, Liu Z, Wu Y, Weng S, He J
2023
The first description of the blue swimming crab (Portunus pelagicus) transcriptome and immunological defense mechanism in response to white spot syndrome virus (WSSV).
Tribamrung N, Bunnoy A, Chuchird N, Srisapoome P
2023
Complete genome sequence and characterization of four Decapod iridescent virus 1 isolates from crab and shrimp.
Qin P, Wang G, Luan Y, Xie J, He J, Shi H, Xu W
2023
Protective Effects of Combined Utilization of Quercetin and Florfenicol on Acute Hepatopancreatic Necrosis Syndrome Infected
Zhai Q, Chang Z, Li J, Li J
2022
The sORF-Encoded Peptides, ATP Synthase Subunits, Facilitate WSSV Duplication in Shrimp.
Huo LJ, Lu PY, Li DX, Shi XZ
2022
First Discovery of Beta-Sitosterol as a Novel Antiviral Agent against White Spot Syndrome Virus.
Chen C, Shen JL, Liang CS, Sun ZC, Jiang HF
2022
Monodon baculovirus (MBV) infects wild mud crab, Scylla serrata.
Rajendran KV, Pagare S, Raut S, Pani Prasad K, Pathan MA
2022
Emerging Diseases and Epizootics in Crabs Under Cultivation
Christopher J. Coates; Andrew F. Rowley
2022
pH-sensitive chitosan nanoparticles loaded with dolutegravir as milk and food admixture for paediatric anti-HIV therapy.
Priya Dharshini K, Fang H, Ramya Devi D, Yang JX, Luo RH, Zheng YT, Brzeziński M, Vedha Hari BN
2021
Virome Analysis of Signal Crayfish (Pacifastacus leniusculus) along Its Invasion Range Reveals Diverse and Divergent RNA Viruses
Bacnik,K., Kutnjak,D., Cerni,S., Bielen,A. and Hudina,S.
2021
Co-Infection of Infectious Hypodermal and Hematopoietic Necrosis Virus (IHHNV) and White Spot Syndrome Virus (WSSV) in the Wild Crustaceans of Andaman and Nicobar Archipelago, India.
Saravanan Kandasamy; Praveenraj Jayasimhan; Kiruba-Sankar Rajendran; Devi Varsha; Biswas Utpal; Kumar Thangaraj Sathish; Sudhagar Arun; El-Matbouli Mansour; Kumar Gokhlesh
2021
Mass mortality in freshwater mussels (Actinonaias pectorosa) in the Clinch River, USA, linked to a novel densovirus.
Richard JC, Leis E, Dunn CD, Agbalog R, Waller D, Knowles S, Putnam J, Goldberg TL
2020
Characterization of a chitinase-1 gene (PtCht-1) from a marine crab Portunus trituberculatus and its response to immune stress.
Song L, Lv J, Wang L, Sun D, Gao B, Liu P
2020
dsRNA-seq Reveals Novel RNA Virus and Virus-Like Putative Complete Genome Sequences from Hymeniacidon sp. Sponge.
Urayama SI, Takaki Y, Hagiwara D, Nunoura T
2020
Identification of Single Nucleotide Polymorphisms Related to the Resistance Against Acute Hepatopancreatic Necrosis Disease in the Pacific White Shrimp
Zhang Q, Yu Y, Wang Q, Liu F, Luo Z, Zhang C, Zhang X, Huang H, Xiang J, Li F
2019
Cryo-electron Microscopy Structures of Novel Viruses from Mud Crab
Gao Y, Liu S, Huang J, Wang Q, Li K, He J, He J, Weng S, Zhang Q
2019
Discovery of Novel Crustacean and Cephalopod Flaviviruses: Insights into the Evolution and Circulation of Flaviviruses between Marine Invertebrate and Vertebrate Hosts.
Parry R, Asgari S
2019
The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Chen NC, Yoshimura M, Miyazaki N, Guan HH, Chuankhayan P, Lin CC, Chen SK, Lin PJ, Huang YC, Iwasaki K, Nakagawa A, Chan SI, Chen CJ
2019
Analysis of the transcriptome data in Litopenaeus vannamei reveals the immune basis and predicts the hub regulation-genes in response to high-pH stress.
Huang W, Li H, Cheng C, Ren C, Chen T, Jiang X, Cheng K, Luo P, Hu C
2018
Differential expression of microRNAs in Portunus trituberculatus in response to Hematodinium parasites.
Li M, Huang Q, Wang J, Li C
2018
β-actin gene expression is variable among individuals and not suitable for normalizing mRNA levels in Portunus trituberculatus.
Zhou SM, Tao Z, Shen C, Qian D, Wang CL, Zhou QC, Jin S
2018
Molecular cloning and expression analysis of a prawn (Macrobrachium rosenbergii) juvenile hormone esterase-like carboxylesterase following immune challenge.
Zhu XJ, Xiong Y, He W, Jin Y, Qian YQ, Liu J, Dai ZM
2018
Characterization of three caspases and their pathogen-induced expression pattern in Portunus trituberculatus.
Ren X, Yu X, Gao B, Liu P, Li J
2017
iTRAQ-Based Identification of Proteins Related to Muscle Growth in the Pacific Abalone, Haliotis discus hannai.
Huang J, You W, Luo X, Ke C
2017
Effects of dietary lipids on the hepatopancreas transcriptome of Chinese mitten crab (Eriocheir sinensis).
Wei B, Yang Z, Wang J, Chen A, Shi Q, Cheng Y
2017
Characterization and prevalence of a novel white spot syndrome viral genotype in naturally infected wild crayfish,
Jiang Luzhi; Xiao Jinzhou; Liu Liyuan; Pan Yingjie; Yan Shuling; Wang Yongjie
2017
Identification of a novel class B scavenger receptor homologue in Portunus trituberculatus: Molecular cloning and microbial ligand binding.
Yang N, Zhang DF, Tao Z, Li M, Zhou SM, Wang GL
2016
Genome Sequence Analysis of CsRV1: A Pathogenic Reovirus that Infects the Blue Crab Callinectes sapidus Across Its Trans-Hemispheric Range.
Flowers EM, Bachvaroff TR, Warg JV, Neill JD, Killian ML, Vinagre AS, Brown S, Almeida AS, Schott EJ
2016
Identification of a novel clip domain serine proteinase (Sp-cSP) and its roles in innate immune system of mud crab Scylla paramamosain.
Sun W, Li Z, Wang S, Wan W, Wang S, Wen X, Zheng H, Zhang Y, Li S
2015
Three novel Toll genes (PtToll1-3) identified from a marine crab, Portunus trituberculatus: Different tissue expression and response to pathogens.
Zhou SM, Yuan XM, Liu S, Li M, Tao Z, Wang GL
2015
RNA-seq analysis of Macrobrachium rosenbergii hepatopancreas in response to Vibrio parahaemolyticus infection.
Rao R, Bing Zhu Y, Alinejad T, Tiruvayipati S, Lin Thong K, Wang J, Bhassu S
2015
First description and expression analysis of tumor necrosis factor receptor-associated factor 6 (TRAF6) from the swimming crab, Portunus trituberculatus.
Zhou SM, Li M, Yang N, Liu S, Yuan XM, Tao Z, Wang GL
2015
Cis- and trans-regulation of luteovirus gene expression by the 3' end of the viral genome.
Miller WA, Jackson J, Feng Y
2015
In-depth transcriptome analysis of the red swamp crayfish Procambarus clarkii.
Shen H, Hu Y, Ma Y, Zhou X, Xu Z, Shui Y, Li C, Xu P, Sun X
2014
Rapid detection of shrimp white spot syndrome virus by real time, isothermal recombinase polymerase amplification assay.
Xia X, Yu Y, Weidmann M, Pan Y, Yan S, Wang Y
2014
Molecular cloning, genomic structure and antimicrobial activity of PtALF7, a unique isoform of anti-lipopolysaccharide factor from the swimming crab Portunus trituberculatus.
Liu Y, Cui Z, Li X, Song C, Shi G, Wang C
2013
Identification and molecular characterization of a C-type lectin-like protein from Chinese shrimp (Fenneropenaeus chinensis).
Lai X, Kong J, Wang Q, Wang W, Meng X
2013
Susceptibility of testicular cell cultures of crab, Scylla serrata (Forskal) to white spot syndrome virus.
Shashikumar A, Desai PV
2013
New host range for Hematodinium in southern Australia and novel tools for sensitive detection of parasitic dinoflagellates.
Gornik SG, Cranenburgh A, Waller RF
2013
Two isoforms of anti-lipopolysaccharide factors identified and characterized from the hemocytes of portunid crabs, Portunus pelagicus and Scylla tranquebarica.
Afsal VV, Antony SP, Chaithanya ER, Singh IS, Philip R
2012
Loading additional literature...
Geographic Distribution
China
1 isolates
Taxonomy Information
Family
Tombusviridae
Host Phylum
Arthropoda
Genome Type
ssRNA(+)
Discovery Method
metagenomic_environmental
Related Isolates
| Accession | Length | GC | Completeness | Country | Year |
|---|---|---|---|---|---|
| PP215318 | 4,800 | 55.8 | unknown | China | N/A |
Sequence
Loading sequence...