PP215262
Picornaviridae相关病毒
Genome And Source
Length
8,737
Type
ssRNA(+)
GC%
39.3%
Completeness
unknown
Country
China
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
1
Hosts
1
Proteins
✓
Sequence
Related Viruses
No related viruses found.
Outbreak Events
None
Portunus trituberculatus picorna-like virus 1 outbreak
Reference
Enormous diversity and cross-species transmission of RNA viruses in economic crustaceans
Dong,X., Meng,F., Zhou,C., Li,J., Hu,T., Wang,Y., Wang,G., Luo,J., Liu,S., Huang,J. and Shi,W.
Unpublished unknown
DOI: 10.1128/msystems.01016-24
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Aalivirus apekidu (Aalivirus)
- Ailurivirus agiapa (Ailurivirus)
- Ampivirus apilisi (Ampivirus)
- Anativirus aductai (Anativirus)
- Anativirus biphaco (Anativirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Poornima
123
Table 1 Discovery of viruses in humans, terrestrial and marine animals, plants and insects and understanding viral ecology using metagenomics
Objective
Finding
Reference
Discovery of viruses in human diseases
To develop a method for vir
Viruses are abundant biological entities on earth and the emergence of viral pathogens has become a serious threat to aquaculture and fisheries worldwide.
pathogenicity · medium
Proteomic analysis of muscle between hybrid abalone andparental lines Haliotis gigantea Reeve and Haliotis discus hannai Ino A proteomic study on postdiapaused embryonic development of brine shrimp (Artemia franciscana) Proteomic Comparison between T
pathogenicity · medium
Temperature
In fact, phylogenetic analyses
of the 5NCR of picornavirus reveal extensive structure-con-
serving substitutions within predicted stems, a high degree of
sequence conservation in predicted loops, and clustering of
regions with sequence divergence in
temperature · medium
Proteomic analysis of muscle between hybrid abalone andparental lines Haliotis gigantea Reeve and Haliotis discus hannai Ino A proteomic study on postdiapaused embryonic development of brine shrimp (Artemia franciscana) Proteomic Comparison between T
temperature · medium
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (112 articles)
Enormous diversity and cross-species transmission of RNA viruses in economic crustaceans
Dong,X., Meng,F., Zhou,C., Li,J., Hu,T., Wang,Y., Wang,G., Luo,J., Liu,S., Huang,J. and Shi,W.
unknown
Shellfish as a Potential Source of Hepatitis E Virus: Epidemiological Evidence, Biological Plausibility, and Research Gaps.
Okamoto H
2026
The Regulatory Effect and Molecular Mechanism of the Anti-Lipopolysaccharide Factor-like Gene on the Resistance of Shrimp (
Yang B, Zhang L, Fu F, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Xing Q, Li X, Meng X
2025
Integrin β Regulates the Hepatopancreas Antiviral Innate Immune System by Affecting the Expression of Antimicrobial Peptides in
Yang B, Zhang L, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Li X, Meng X
2025
MAP3K15 facilitates multiple viral genes expression in crustaceans via Dorsal-CC-CL-STAT axis besides the JNK/P38 pathway.
Ran XQ, Liu CC, Xu XM, Wu XM, Kang CJ
2025
LtrA is critical for biofilm formation and colonization of Vibrio parahaemolyticus on food-related surfaces.
Xiong S, Zhang N, Sun H, Zhang M, Li X, Luo X, Zhang Y, Lu R
2025
A Metagenomic Survey of Virological Hazards in Market-Ready Oysters.
Dirks RAM, Sosef NP, Zwartkruis-Nahuis JTM, Thijssen MMA, Jansen CCC, Boxman ILA
2025
RNA virus diversity highlights the potential biosecurity threat posed by Antarctic krill
Tingting Xu; Xianyong Zhao; Thomas P. Loch; Jiancheng Zhu; Wei Wang; Xinliang Wang; Chong Wang; Gangzhou Fan
2025
Charting the Future: Advanced Technologies for Sustainable Parasite Control in Aquaculture.
Yang J, Bhassu S, Rajamanikam A.
2025
Giant RNA genomes: Roles of host, translation elongation, genome architecture, and proteome in nidoviruses
Neuman BW; Smart A; Gilmer O; Smyth RP; Vaas J; Böker N; Samborskiy DV; Bartenschlager R; Seitz S; Gorbalenya AE; Caliskan N; Lauber C
2025
Comparative transcriptomic and molecular biology analyses to explore potential immune responses to
Chen D, Xin Y, Teng J, Zhao X, Lu J, Li Y, Wang H
2024
Viral metagenomic investigation of two Caribbean echinoderms,
Hewson I, Brandt M, Budd K, Breitbart M, DeRito C, Gittens S, Henson MW, Hylkema A, Sevier M, Souza M, Vilanova-Cuevas B, Von Hoene S
2024
Ecological interactions between marine RNA viruses and planktonic copepods.
Hirai J, Katakura S, Kasai H, Nagai S
2024
A Chromosome-level genome assembly of giant river prawn (Macrobrachium rosenbergii).
Zheng Y, Guo G, Lv Y, Gao Q, Zhou D, Zhang L, Tu G, Weng S, Li C, He J, Wang M
2024
circRNA_8521 promotes Senecavirus A infection by sponging miRNA-324 to regulate LC3A.
Yang X, Liu R, Du Y, Mei C, Zhang G, Wang C, Yang Y, Xu Z, Li W, Liu X
2024
Metatranscriptomic data mining together with microfluidic card uncovered the potential pathogens and seasonal RNA viral ecology in a drinking water source.
Shen L, Zhang Z, Wang R, Wu S, Wang Y, Fu S
2024
Viral Diversity in Samples of Freshwater Gastropods
Butina TV, Zemskaya TI, Bondaryuk AN, Petrushin IS, Khanaev IV, Nebesnykh IA, Bukin YS
2023
Symbiotic survey of the bay scallop (Argopecten irradians) from the Gulf coast of Florida, USA.
Scro AK, Bojko J, Behringer DC
2023
Detection of novel RNA viruses in wild noble crayfish (Astacus astacus): A virome analysis in Swiss water bodies.
Zingre T, Pisano SRR, Wildi N, Dawson KLD, Cristina E, Seuberlich T, Schmidt-Posthaus H
2023
The structure and mechanism of action of a distinct class of dicistrovirus intergenic region IRESs.
Abaeva IS, Young C, Warsaba R, Khan N, Tran LV, Jan E, Pestova TV, Hellen CUT
2023
Virome Analysis Provides an Insight into the Viral Community of Chinese Mitten Crab
Guo G, Wang M, Zhou D, He X, Han P, Chen G, Zeng J, Liu Z, Wu Y, Weng S, He J
2023
In silico screening of chalcones and flavonoids as potential inhibitors against yellow head virus 3C-like protease.
Boonthaworn K, Hengphasatporn K, Shigeta Y, Chavasiri W, Rungrotmongkol T, Ounjai P
2023
Viruses of a key coral symbiont exhibit temperature-driven productivity across a reefscape.
Howe-Kerr LI, Grupstra CGB, Rabbitt KM, Conetta D, Coy SR, Klinges JG, Maher RL, McConnell KM, Meiling SS, Messyasz A, Schmeltzer ER, Seabrook S, Sims JA, Veglia AJ, Thurber AR, Thurber RLV, Correa AMS
2023
Limited cross-species virus transmission in a spatially restricted coral reef fish community.
Costa VA, Bellwood DR, Mifsud JCO, Van Brussel K, Geoghegan JL, Holmes EC, Harvey E
2023
The first description of the blue swimming crab (Portunus pelagicus) transcriptome and immunological defense mechanism in response to white spot syndrome virus (WSSV).
Tribamrung N, Bunnoy A, Chuchird N, Srisapoome P
2023
Complete genome sequence and characterization of four Decapod iridescent virus 1 isolates from crab and shrimp.
Qin P, Wang G, Luan Y, Xie J, He J, Shi H, Xu W
2023
A novel virus in the family Marnaviridae as a potential pathogen of Penaeus vannamei glass post-larvae disease.
Xu A, Xu S, Tu Q, Qiao H, Lin W, Li J, He Y, Xie T, Pan L, Pan Q, Zhao Y, Su X, Tong Y.
2023
Viruses of Freshwater Mussels during Mass Mortality Events in Oregon and Washington, USA.
Richard Jordan C; Blevins Emilie; Dunn Christopher D; Leis Eric M; Goldberg Tony L
2023
Protective Effects of Combined Utilization of Quercetin and Florfenicol on Acute Hepatopancreatic Necrosis Syndrome Infected
Zhai Q, Chang Z, Li J, Li J
2022
Metagenomic Assessment of DNA Viral Diversity in Freshwater Sponges,
Butina TV, Petrushin IS, Khanaev IV, Bukin YS
2022
Virome Analysis of Normal and Growth Retardation Disease-Affected Macrobrachium rosenbergii.
Zhou D, Liu S, Guo G, He X, Xing C, Miao Q, Chen G, Chen X, Yan H, Zeng J, Zheng Z, Deng H, Weng S, He J
2022
The sORF-Encoded Peptides, ATP Synthase Subunits, Facilitate WSSV Duplication in Shrimp.
Huo LJ, Lu PY, Li DX, Shi XZ
2022
First Discovery of Beta-Sitosterol as a Novel Antiviral Agent against White Spot Syndrome Virus.
Chen C, Shen JL, Liang CS, Sun ZC, Jiang HF
2022
Detection of Human and Fish Viruses in Marine Gastropods.
Errani F, Ciulli S, Mandrioli L, Serratore P, Volpe E
2022
Monodon baculovirus (MBV) infects wild mud crab, Scylla serrata.
Rajendran KV, Pagare S, Raut S, Pani Prasad K, Pathan MA
2022
Emerging Diseases and Epizootics in Crabs Under Cultivation
Christopher J. Coates; Andrew F. Rowley
2022
Tracing the fate of wastewater viruses reveals catchment-scale virome diversity and connectivity.
Adriaenssens EM, Farkas K, McDonald JE, Jones DL, Allison HE, McCarthy AJ
2021
Establishing a gold standard method for the detection of Cherax reovirus using reverse transcriptase, quantitative, polymerase chain reaction.
Jaroenram W, Hayakijkosol O, Owens L, Elliman J
2021
Can shellfish be used to monitor SARS-CoV-2 in the coastal environment?
Desdouits M, Piquet JC, Wacrenier C, Le Mennec C, Parnaudeau S, Jousse S, Rocq S, Bigault L, Contrant M, Garry P, Chavanon F, Gabellec R, Lamort L, Lebrun L, Le Gall P, Meteigner C, Schmitt A, Seugnet JL, Serais O, Peltier C, Bressolette-Bodin C, Blanchard Y, Le Guyader FS
2021
pH-sensitive chitosan nanoparticles loaded with dolutegravir as milk and food admixture for paediatric anti-HIV therapy.
Priya Dharshini K, Fang H, Ramya Devi D, Yang JX, Luo RH, Zheng YT, Brzeziński M, Vedha Hari BN
2021
Human and Animal RNA Virus Diversity Detected by Metagenomics in Cameroonian Clams.
Bonny P, Schaeffer J, Besnard A, Desdouits M, Ngang JJE, Le Guyader FS
2021
Virus-derived sequences from the transcriptomes of two snail vectors of schistosomiasis,
Liu S, Zhang SM, Buddenborg SK, Loker ES, Bonning BC
2021
Virome Analysis of Signal Crayfish (Pacifastacus leniusculus) along Its Invasion Range Reveals Diverse and Divergent RNA Viruses
Bacnik,K., Kutnjak,D., Cerni,S., Bielen,A. and Hudina,S.
2021
Co-Infection of Infectious Hypodermal and Hematopoietic Necrosis Virus (IHHNV) and White Spot Syndrome Virus (WSSV) in the Wild Crustaceans of Andaman and Nicobar Archipelago, India.
Saravanan Kandasamy; Praveenraj Jayasimhan; Kiruba-Sankar Rajendran; Devi Varsha; Biswas Utpal; Kumar Thangaraj Sathish; Sudhagar Arun; El-Matbouli Mansour; Kumar Gokhlesh
2021
Coral-Associated Viral Assemblages From the Central Red Sea Align With Host Species and Contribute to Holobiont Genetic Diversity.
Cárdenas A, Ye J, Ziegler M, Payet JP, McMinds R, Vega Thurber R, Voolstra CR
2020
An Unconventional Flavivirus and Other RNA Viruses in the Sea Cucumber (Holothuroidea; Echinodermata) Virome.
Hewson I, Johnson MR, Tibbetts IR
2020
Mass mortality in freshwater mussels (Actinonaias pectorosa) in the Clinch River, USA, linked to a novel densovirus.
Richard JC, Leis E, Dunn CD, Agbalog R, Waller D, Knowles S, Putnam J, Goldberg TL
2020
Loading additional literature...
Geographic Distribution
China
1 isolates
Taxonomy Information
Family
Picornaviridae
Host Phylum
Arthropoda
Genome Type
ssRNA(+)
Discovery Method
metagenomic_with_host_evidence
Related Isolates
| Accession | Length | GC | Completeness | Country | Year |
|---|---|---|---|---|---|
| PP215262 | 8,737 | 39.3 | unknown | China | N/A |
Sequence
Loading sequence...