Genome And Source
Length
9,308
Type
ssRNA(+)
GC%
44.7%
Completeness
unknown
Country
China
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
1
Hosts
1
Proteins
✓
Sequence
Related Viruses
No related viruses found.
Outbreak Events
None
Eriocheir sinensis dicistro-like virus outbreak
Reference
Direct Submission
Xu,S., Xu,A., Tu,Q., Qiao,H., Lin,W., Li,J., He,Y., Xie,T., Pan,L., Sun,H., Zhao,Y. Sr. and Tong,Y. Sr.
Submitted (17-MAY-2022) Beijing University of Chemical Technology, 15 East North Third Ring Road, Beijing 100029, China ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## 2022
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Aparavirus apisacutum (Aparavirus)
- Aparavirus cancerluti (Aparavirus)
- Aparavirus israelense (Aparavirus)
- Aparavirus kashmirense (Aparavirus)
- Aparavirus tauraense (Aparavirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Auto-extracted: mortality in 'The first detection of white spot syndrome virus in naturally infected cultured Chinese mitten crabs, Eriocheir sinensis'
A cumulative mortality of 100% was observed within 10 days post WSSV injection.
mortality · medium
Auto-extracted: mortality in 'Development of TaqMan qPCR and MIRA detection methods of Hepatospora eriocheir in Chinese mitten crab.'
mortality · medium
Poornima
123
Table 1 Discovery of viruses in humans, terrestrial and marine animals, plants and insects and understanding viral ecology using metagenomics
Objective
Finding
Reference
Discovery of viruses in human diseases
To develop a method for vir
Viruses are abundant biological entities on earth and the emergence of viral pathogens has become a serious threat to aquaculture and fisheries worldwide.
pathogenicity · medium
caviae to Eriocheir sinensis through experimental infection, with an LD50 value of 1.6 × 106 CFU/mL [50].
pathogenicity · medium
Recently, EsBeclin1 from Eriocheir sinensis was identified as a homologue of invertebrate Beclin1, in which the mRNA transcripts of EsBeclin1 in hemocytes was up-regulated after immune stimulations with Lipopolysaccharide (LPS) or post challenge of A
pathogenicity · medium
Moreover, CAS upregulation has been shown in Erichor
sinensis hemocytes after Spiroplasma eriocheris challenge [79,80].
pathogenicity · medium
identified
33 dysregulated miRNAs in crayfish Procambarus clarkii
upon challenge with Spirolasma eriocheiris [11].
pathogenicity · medium
Pathogenicity terms found: mortality, lethal, symptom
pathogenicity · high
Fulltext: mortality, lethal, symptom
pathogenicity · high
Fulltext: mortality, lethal, symptom
pathogenicity · high
Temperature
Auto-extracted: temperature in 'Development of TaqMan qPCR and MIRA detection methods of Hepatospora eriocheir in Chinese mitten crab.'
temperature · medium
Fulltext: °C
temperature · medium
Fulltext: °C
temperature · medium
Temperature data found: heat, °C
temperature · high
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (114 articles)
Genomic and phylogenetic characterization of a bunya-like virus from the freshwater Chinese mitten crab Eriocheir sinensis
Shen,H., Huang,P. and Zhang,X.
unknown
Eriocheir sinensis PI3K-mediated 14-3-3ζ phosphorylation at a conserved tyrosine residue enhances ROS production to defend against Spiroplasma eriocheiris infection.
Yao Y, Ma Y, Yin X, Yu Z, Yan J, Hou L, Xu X, Gu W, Meng Q.
2026
Physiological and biochemical characterization of trypsin from Neocaridina denticulata sinensis and its roles in ontogenesis and immune response.
Feng D, Song Y, Wu Z, Liu W, Pu Y, Gao Y, Sun Y, Zhang J
2026
Combined Vibrio and nanoplastics stress promotes nanoplastic accumulation while reducing bacterial lethality in shrimp.
Zhong R, Fang X, Li C, Zheng B, Zhang G, Gong H, Yan M
2026
Detection of Metschnikowia bicuspidata in Chinese Mitten Crabs (Eriocheir sinensis) Using Recombinase Polymerase Amplification
Lu Liu; Ye Zhao; Xiaoyu Zhang; Chengcheng Feng; Cangshuo Liu; Jie Bao; Hongbo Jiang
2026
Development of TaqMan qPCR and MIRA detection methods of Hepatospora eriocheir in Chinese mitten crab.
Yin X, Zhu Y, Xuan J, Huang S, He C, Gu W, Meng Q.
2026
The Regulatory Effect and Molecular Mechanism of the Anti-Lipopolysaccharide Factor-like Gene on the Resistance of Shrimp (
Yang B, Zhang L, Fu F, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Xing Q, Li X, Meng X
2025
Effects of dietary vitamin E on growth, immune response, antioxidant capacity, intestinal histomorphology, digestibility and disease resistance of juvenile Pacific white shrimp (Penaeus vannamei).
Ko D, Medagoda N, Shin J, Hasanthi M, Bae J, Min BH, Lee KJ
2025
Integrin β Regulates the Hepatopancreas Antiviral Innate Immune System by Affecting the Expression of Antimicrobial Peptides in
Yang B, Zhang L, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Li X, Meng X
2025
FOXO is involved in anti-WSSV immunity by regulating autophagy-related genes.
Liu X, Huang Y, Zhu Z, Zhang Z, Zhang L, Zheng L, Li H, Huang X, Dai X, Ren Q
2025
Virulence and Antibiotic Resistance of Pathogenic <i>Aeromonas caviae</i> from Diseased <i>Macrobrachium rosenbergii</i>.
Zhu X, Qian Q, Chen A, Zhou L, Zhang Y, Gao X, Jiang Q, Zhang X.
2025
Biosecurity and Vaccines for Emerging Aquatic Animal RNA Viruses.
Ahmadivand S, Savage ACNP, Palic D.
2025
Comparative transcriptomic and molecular biology analyses to explore potential immune responses to
Chen D, Xin Y, Teng J, Zhao X, Lu J, Li Y, Wang H
2024
Effects of supplementation with freeze-dried Clostridium butyricum powder after replacement of fishmeal with cottonseed protein concentrate on growth performance, immune response, and intestinal microbiota of Litopenaeus vannamei.
Wang Q, Fan D, Hu Y, Liu H, Tan B, Xie S, Chen Q
2024
The role of pattern recognition receptors in the innate immune system of Chinese mitten crab (Eriocheir sinensis).
Shi C, Lin TH, Qu C
2024
Effects of a phytobiotic-based additive on the growth, hepatopancreas health, intestinal microbiota, and
Ma Q, Zhao G, Liu J, Chen IT, Wei Y, Liang M, Dai P, Nuez-Ortin WG, Xu H
2024
Virus discovery in cultured portunid crabs: Genomic, phylogenetic, histopathological and microscopic characterization of a reovirus and a new bunyavirus.
Tavares CPDS, Cibulski SP, Castilho-Westphal GG, Zhao M, Silva UAT, Schott EJ, Ostrensky A
2024
Crab microRNA-381-5p regulates prophenoloxidase activation and phagocytosis to promote intracellular bacteria Spiroplasma eriocheiris infection by targeting mannose-binding protein.
Ma Y, Li W, Yang G, Fan Y, Wei P, Liu H, Li X, Gu W, Zhou J, Meng Q
2024
Comparative Analysis of Transposable Elements Reveals the Diversity of Transposable Elements in Decapoda and Their Effects on Genomic Evolution.
Xu Y, Tang Y, Feng W, Yang Y, Cui Z
2023
Detection of novel RNA viruses in wild noble crayfish (Astacus astacus): A virome analysis in Swiss water bodies.
Zingre T, Pisano SRR, Wildi N, Dawson KLD, Cristina E, Seuberlich T, Schmidt-Posthaus H
2023
A metagenomic comparison of clearwater, probiotic, and Rapid BFT
Waiho K, Abd Razak MS, Abdul Rahman MZ, Zaid Z, Ikhwanuddin M, Fazhan H, Shu-Chien AC, Lau NS, Azmie G, Ishak AN, Syahnon M, Kasan NA
2023
The structure and mechanism of action of a distinct class of dicistrovirus intergenic region IRESs.
Abaeva IS, Young C, Warsaba R, Khan N, Tran LV, Jan E, Pestova TV, Hellen CUT
2023
Virome Analysis Provides an Insight into the Viral Community of Chinese Mitten Crab
Guo G, Wang M, Zhou D, He X, Han P, Chen G, Zeng J, Liu Z, Wu Y, Weng S, He J
2023
White spot syndrome virus impact on the expression of immune genes and gut microbiome of black tiger shrimp Penaeus monodon.
Jatuyosporn T, Laohawutthichai P, Romo JPO, Gallardo-Becerra L, Lopez FS, Tassanakajon A, Ochoa-Leyva A, Krusong K
2023
A novel virus in the family Marnaviridae as a potential pathogen of Penaeus vannamei glass post-larvae disease.
Xu A, Xu S, Tu Q, Qiao H, Lin W, Li J, He Y, Xie T, Pan L, Pan Q, Zhao Y, Su X, Tong Y.
2023
Transmission Routes and a New Freshwater Crustacean Host for Infectious Precocity Virus (IPV)
Wenyan Xu; Caiyuan Zhao; Xiaoyi Pan; Xinyi He; Xiaoli Liu; Jianan Hou; Jianhu Pang
2023
Viruses of Freshwater Mussels during Mass Mortality Events in Oregon and Washington, USA.
Richard Jordan C; Blevins Emilie; Dunn Christopher D; Leis Eric M; Goldberg Tony L
2023
Mechanisms Underlying the Virulence Regulation of
Yi X, Xu X, Qi X, Chen Y, Zhu Z, Xu G, Li H, Kraco EK, Shen H, Lin M, Zheng J, Qin Y, Jiang X
2022
RNA-seq analysis revealing the immune response of Neocaridina denticulata sinensis gill to Vibrio parahaemolyticus infection.
Kong W, Wu Z, Liu Y, Yan C, Zhang J, Sun Y
2022
Biochemical indexes and gut microbiota testing as diagnostic methods for
Soo TCC, Bhassu S
2022
Transcriptome analysis of Neocaridina denticulate sinensis challenged by Vibrio parahemolyticus.
Liu Y, Xing K, Yan C, Zhou Y, Xu X, Sun Y, Zhang J
2022
Host-microbiota interactions and responses of
Liao M, Liao X, Long X, Zhao J, He Z, Zhang J, Wu T, Sun C
2022
Development and Visualization Improvement for the Rapid Detection of Decapod Iridescent Virus 1 (DIV1) in
Xu Y, Wang Y, Hu J, Bao Z, Wang M
2022
Autophagy and white spot syndrome virus infection in crustaceans.
Jian JT, Liu LK, Liu HP
2022
A new SVWC protein functions as a pattern recognition protein in antibacterial responses in Chinese mitten crab (Eriocheirsinensis).
Qin Y, Luo Z, Zhao K, Nan X, Guo Y, Li W, Wang Q
2022
First Discovery of Beta-Sitosterol as a Novel Antiviral Agent against White Spot Syndrome Virus.
Chen C, Shen JL, Liang CS, Sun ZC, Jiang HF
2022
Identification of three novel Spätzle genes in Eriocheir sinensis and their roles during white spot syndrome virus infection.
Nie X, Dai X, Zhao Y, Xu H, Han Z, Jia R, Ren Q, Huang X
2022
Validation of qPCR from a crude extract for the rapid detection of
Ma C, Tian Z, Yang L, Cao J
2022
Proteomics analysis reveals a critical role for the WSSV immediate-early protein IE1 in modulating the host prophenoloxidase system.
Wang C, Wei M, Wu G, He L, Zhu J, Juventus Aweya J, Chen X, Zhao Y, Zhang Y, Yao D
2022
The expanded inhibitor of apoptosis gene family in oysters possesses novel domain architectures and may play diverse roles in apoptosis following immune challenge.
Witkop EM, Proestou DA, Gomez-Chiarri M
2022
The ARM repeat domain of hemocyanin interacts with MKK4 to modulate antimicrobial peptides expression.
Aweya JJ, Zhuang K, Liu Y, Fan J, Yao D, Wang F, Chen X, Li S, Ma H, Zhang Y
2022
Direct Submission
Xu,S., Xu,A., Tu,Q., Qiao,H., Lin,W., Li,J., He,Y., Xie,T., Pan,L., Sun,H., Zhao,Y. Sr. and Tong,Y. Sr.
2022
Emerging Diseases and Epizootics in Crabs Under Cultivation
Christopher J. Coates; Andrew F. Rowley
2022
The Molecular Mechanism of Hemocyte Immune Response in
He Z, Zhao J, Chen X, Liao M, Xue Y, Zhou J, Chen H, Chen G, Zhang S, Sun C
2021
Molecular characterization and functional analysis of the lysosomal
Huang L, Wu BL, He JX, Zhang Y, Chen J, Chen XJ
2021
Mini Review: Virus Interference: History, Types and Occurrence in Crustaceans.
Escobedo-Bonilla CM
2021
A newly identified Hippo homologue from the oriental river prawn Macrobrachium nipponense is involved in the antimicrobial immune response.
Huang Y, Ren Q
2021
Metatranscriptomic Analysis Reveals an Imbalance of Hepatopancreatic Flora of Chinese Mitten Crab
Shen Z, Kumar D, Liu X, Yan B, Fang P, Gu Y, Li M, Xie M, Yuan R, Feng Y, Hu X, Cao G, Xue R, Chen H, Liu X, Gong C
2021
Loading additional literature...
Geographic Distribution
China
1 isolates
Taxonomy Information
Family
Dicistroviridae
Host Phylum
Arthropoda
Genome Type
ssRNA(+)
Discovery Method
metagenomic_with_host_evidence
Related Isolates
| Accession | Length | GC | Completeness | Country | Year |
|---|---|---|---|---|---|
| OP019097 | 9,308 | 44.7 | unknown | China | N/A |
Sequence
Loading sequence...