Shrimp glass disease virus

Unclassified Arthropoda extended

ON550424

Laem-Singh病毒

Genome And Source

Length
9,859
Type
dsDNA
GC%
41.9%
Completeness
unknown
Country
N/A
Year
N/A

📋 Data Provenance

🗄️
Source
GenBank / NCBI
🔗
Accession
ON550424
📁
Entry Type
complete_genome
🕒
Last Updated
N/A

Genome Browser

No ORF position data available for this genome.

Curation Status

1
Isolates
1
Hosts
1
Proteins
Sequence

Related Viruses

No related viruses found.

Reference

Direct Submission

Xu,S., Xu,A., Tu,Q., Qiao,H., Lin,W., Li,J., He,Y., Xie,T., Pan,L., Sun,H., Zhao,Y. Sr. and Tong,Y. Sr.

Submitted (17-MAY-2022) Beijing University of Chemical Technology, 15 East North Third Ring Road, Beijing 100029, China ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## 2022

ICTV Mapping

No ICTV mapping is available or reviewed for this record.

Reviewed Evidence

Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.

Virulence / pathogenicity

Finally, nanovaccine efficacy was tested in a lethal WSSV challenge model in vivo in shrimp.
pathogenicity · medium
There was minimal (n = 7) overlap in the differentially expressed miRNAs detected in shrimp and crabs in response to WSSV challenge.
pathogenicity · medium
The shrimp were fed with antibody added to the shrimp diet (10 µg of respective antibody per gram of feed (equivalent to 8% bodyweight/day)) every day for three days prior to the challenge test.
pathogenicity · medium
Case and control farms were detected as below: (1) Cases shrimp farms met two requests: (a) Had at least one pond that was positive for AHPND based on real-time PCR and (b) had tiger shrimps or white leg shrimps in at least one pond, showing at least
pathogenicity · medium
When working with archival DFPE shrimp tissue, there is an additional challenge because shrimp tissues are fixed in Davidson’s fixative instead of formalin.
pathogenicity · medium
To investigate a causative agent for the mortalities, a disease challenge was carried out using infected material from a hatchery experiencing mortalities.
pathogenicity · medium
However, the histological images of shrimp hepatopancreas indicated that the infection rate significantly reduced from 60.0% to 11.1% in shrimps fed with LAB-supplemented feeds and challenged with AHPND V.
pathogenicity · medium
Molluscan cells in culture: Primary cell cultures and cell lines Detection and Description of a Particular Ostreid Herpesvirus 1 Genotype Associated with Massive Mortality Outbreaks of Pacific oysters, Crassostrea gigas, in France in 2008 Identificat
pathogenicity · medium
The evaluation of the safety of the cellulolytic marine bacterial strains for shrimp was tested by immersion challenge with cellulolytic bacteria.
pathogenicity · medium
Genomic selection for white spot syndrome virus resistance in whiteleg shrimp boosts survival under an experimental challenge test White spot syndrome virus (WSSV) causes major worldwide losses in shrimp aquaculture.
pathogenicity · medium

Temperature

Herpes-like viruses associated with high mortality levels in larvae and spat of Pacific oysters, Crassostrea gigas: a comparative study, the thermal effects on virus detection in hatchery-reared larvae, reproduction of the disease in axenic larvae.
temperature · medium
Investigating the microbial inactivation effect of low temperature high pressure carbon dioxide and its application in frozen prawn (Penaeus vannamei) Zimeng Lian , Dong Yang , Yongtao Wang , Liang Zhao , Lei Rao *, Xiaojun Liao College of Food S
temperature · medium
2057 each experiment, shrimp were transferred to an experimental system located at the Laboratory of Virology at Wageningen University and stocked in 180-liter aquariums, each fitted with an individual filter system (Eheim, Germany), heat- ing (Schego
temperature · medium
Herpes-like viruses associated with high mortality levels in larvae and spat of Pacific oysters, Crassostrea gigas : a comparative study, the thermal effects on virus detection in hatchery-reared larvae, reproduction of the disease in axenic larva
temperature · medium
(1995) Herpes-like viruses associated with high mortality levels in larvae and spat of Pacific oysters, Crassostrea gigas: a comparative study, the thermal effects on virus detection in hatchery-reared larvae, reproduction of the disease in axenic
temperature · medium
Effect of air temperature and universal thermal climate index on respiratory diseases mortality in Mashhad, Iran.
temperature · medium
The degree of protection is dependent on the host-virus system and the severity of the disease leading to pathological manifestations of death, both in vivo or in vitro.
temperature · medium
Key strategies for effective water management: Maintaining optimal water temperature: Regularly monitoring and controlling water temperature to prevent thermal stress, which can lead to weakened immune responses and increased susceptibility to diseas
temperature · medium
Oral delivery of WSSV hub dsRNA and WSSV challenge Shrimp Penaeus monodon (10 g body weight) were obtained from a local farm and were acclimatized in a wet laboratory in 1000 liters aquaria containing continuously aerated artificial seawater at 20 pp
temperature · medium
Outlines of the Immune System of Shrimp Fish and shrimp differ significantly in their ability and the degree to which they respond to immune challenge.
Shrimp farming is an aquaculture business for the cultivation of marine shrimps or prawns for human consumption and is now considered as a major economic and food production sector as it is an increasingly important source of protein available for human consumption.
temperature · medium

Diagnostic And Control Records

No curated diagnostic or control records are available for this virus.

Proteins

🧬

No protein annotations available

Related Literature (1807 articles)

Genomic and phylogenetic characterization of a bunya-like virus from the freshwater Chinese mitten crab Eriocheir sinensis
Shen,H., Huang,P. and Zhang,X.
unknown
DOI
Identification of a novel and divergent reptarenavirus in an Amazon coral snake ( <i>Micrurus spixii</i> [Wagler, 1824])
Onishi A, Kishimoto M, Horie M.
2026
DOI
Dissecting the molecular mechanism of shrimp resistance to AHPND in Litopenaeus (Penaeus) vannamei via multi-year comparative transcriptomic analysis.
Gao H, Liu H, Yu Y, Li F
2026
Clinical emergence of a novel sequence type (ST3672) NDM-1-producing
Ni C, Wang J, Yang C, Gao S, Xu Z, Wang Y, Peng H, Cao W, Han Y
2026
Synergistic Effects of Shewanella algae A3 and Serratia marcescens Van80 UB3 on Immune Response, Gene Expression and Resistance to Vibrio parahaemolyticus Vp5 in Pacific White Shrimp.
Sutanti S, Sukenda S, Widanarni W, Alimuddin A, Aliah RS, Widantara H, Hidayatullah D
2026
Development and comparative evaluation of TaqMan real-time PCR assays for detecting Enterocytozoon hepatopenaei (EHP) in penaeid shrimp.
Dinh-Hung N, Mai HN, Dhar AK
2026
Sodium cyclamate enhances Vibrio parahaemolyticus biofilm formation on seafood-contact surfaces.
Zhou Y, Zhang N, Xu W, Li X, Zhang M, Luo X, Ni B, Huang F, Lu R, Zhang Y, Han X
2026
Quantitative Risk Assessment of Hepatitis E Virus from Shellfish Consumption Among Chinese Residents Using Monte Carlo Simulation.
Xie Q, Liu Y, Zhang Z, Zhang H, Xu J, Wang Y, Zhao Y
2026
lncRNA-803 Suppresses Apoptosis in DF-1 Cells via the miR-6555-3p/MDM4/p53 Axis.
Han S, Yang J, Qiu Y, Zhao S, Jiang Y, Han L, Han L
2026
Biological Functions of Silver Nanowires in Inhibiting
Sahoo SR, Liao ZH, Nan FH
2026
Transcriptome analysis revealed immune protection conferred by bath vaccination with formalin-killed Vibrio parahaemolyticus on Penaeusvannamei.
Angela Bermeo-Capunong MR, Matthew Domingo Guzman JP, Langote Alolod GA, Nozaki R, Thawonsuwan J, Koiwai K, Kondo H, Hirono I
2026
Direct LAMP for on-site rapid detection of Vibrio parahaemolyticus in shrimp (Litopenaeus vannamei) aquaculture water.
Pu X, Lu F, Yang Q, Han Z, Zhu X, Chen J, Zhang D, Zhang X
2026
Antimicrobial and anti-biofilm activity of Epigallocatechin gallate against Vibrio parahaemolyticus.
Ji J, Zhang L, Wang H, Xu W, Cai W, Zhang N, Zhang M, Luo X, Li X, Zhang Y, Lu R
2026
Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing.
Florea A, Wade N, Salisbury SJ, Furniss J, Fraslin C, Chapuis A, Sullivan K, Stewart R, Robledo D, Bean TP
2026
Insect SVWC Proteins: A Diverse Cytokine-like Family Orchestrating Multilayered Antiviral and Antibacterial Immunity.
Chen Y, Xu G, Wang J, Zhang C, Abubakar AY, Xia H
2026
Carvacrol as a one health-relevant antimicrobial agent: mechanistic insights on its impact on gnotobiotic Artemia and Vibrio campbellii interactions.
Baruah K, Debnath D, Patabandi PPSK, Bossier P, Yang Q, Defoirdt T, Norouzitallab P
2026
Screening of microalgae with the potential as anti quorum sensing and anti-vibrio agent in shrimp culture.
K Kadriah IA, Sahabuddin S, Nurbaya N, Susianingsih E, Nurhidayah N, Tampangallo BR, Muliani M, Suwoyo HS, Yamin M
2026
Genome-wide characterization of NBS-encoding genes in
Yang X, Zeng F, Liu B, Yang Z, Wei H, Gao J, Wang P, Liu X
2026
Influence of the two-component system PhoBR associated with phosphate-sensing capacity on the virulence mechanism of Vibrio alginolyticus.
Chen Y, Zhang Z, Xu X, Chen J, Zhang L, Wu C, Xiao Y, Sha Y, Guo M
2026
Heat shock factor regulation of antimicrobial peptides expression suggests a conserved defense mechanism induced by febrile temperature in arthropods.
Xiao B, Chen S, Wang Y, Liao X, He J, Li C
2026
Untitled
Dinh TTH, Nguyen QP, Bui TT, Nguyen KN
2026
GPAT3 facilitates AHPND-causing Vibrio parahaemolyticus pathogenesis by driving lipid droplets accumulation in shrimp.
Huang J, Yuan X, Zhang J, Chen X, Zhao Y, Huang X, Liu M, Chen X, Wang C
2026
Whole genome and phylogenomic insights into Vibrio parahaemolyticus from Pacific White Shrimp reveal resistance and virulence traits in Bangladeshi aquaculture.
Masum MHU, Uddin MS, Chamonara K, Sultana S, Islam S, Siddiqua A
2026
Portable and point-of-care molecular detection of pathogenic
Trinh TND, Trinh KTL, Nguyen HA, Nguyen HMT, Nhi NTH, Minh VTT, Nam NN, Lee NY
2026
De novo transcriptome assembly and annotation of Penaeus monodon hemocytes under WSSV infection and STAT knockdown.
Jatuyosporn T, Laohawutthichai P, Cornejo-Granados F, Gallardo-Becerra L, Tassanakajon A, Hurtado-Ramírez JM, Ochoa-Leyva A, Krusong K
2026
Microbial decomposer diversity and metabolic function during the decomposition of brine shrimp carcasses in a saline lake.
Gao L, Fang BZ, Yang J, Lian ZH, Chen Y, Mohamad OAA, Xu QY, Liu YH, Wu D, Yuan Y, Abdugheni R, Li MM, Wang P, Ortúzar M, Li XY, Huang JR, Liu L, Jiang HC, Shu W, Hedlund BP, Li WJ, Jiao JY
2026
Integrating genome-wide association study and functional analysis identify PvPdcd6 and PvDnajc22 as two key regulators of Vibrio parahaemolyticus resistance in Penaeus vannamei.
Luo SS, Liu QY, Chen XL, Wang AJ, Zhang YQ, Hou CJ, Yang CL, Hong-Liu, Zhao YZ, Wang HL
2026
Environmental-driven restructuring of intestinal microbiota promotes host fitness and enhances food safety potential in shrimp pond-cultured Chlamys nobilis.
Xiong D, Sun Y, Zhang H, Lin Q, Ma Q, He C, Zhang C, Zheng H
2026
Native
Pazmiño-Gomez B, Rodas-Pazmiño K, Pazmiño-Pérez R, Tapia-Guijarro T, Balcazar-Quimi W, Valle-Asan S, Salazar-Vera S, Villalva-Vera M, Ochoa-Fajardo D, Rodas-Neira E
2026
Genomic and AHPND pathogenesis characterization of a novel Vibrio parahaemolyticus strain carrying an ISVal1-like insertion in pirB
Huynh TB, Le ML, Bui-Nguyen TA, Ha TPT, Van TTH, Vo VT, Phan MD, Tran-Van H
2026
Dephosphorylation at Ser548 regulates hemocyanin-derived antibacterial peptides and immune defense in
Feng Q, Fu M, Zhao X, Zhao Y, Liu Q, Aweya JJ, Zhang Y
2026
A lightweight deep learning architecture for automatic shrimp disease classification.
Sharma S, Rumahorbo PS, Kondo S, Watanabe S, Okada Y, Gautam BP, Sato K
2026
Integrated nanoemulsion based functional feed against Vibrio parahaemolyticus pathogenesis in Penaeus vannamei: physicochemical characterization and in vivo efficacy.
Ahmed J, Vasagam KPK, Ramalingam K
2026
Multilocus sequence typing of antimicrobial-resistant zoonotic bacteria from shrimp aquaculture environments in Selangor, Malaysia.
Devadas S, Zakaria Z, Mohamed Din MS, Bhassu S, Abd Karim MM, Ikhsan N
2026
Breaking paradigms: Reconsidering the role of harmless vibrios in shrimp health.
Pinos-Tamayo EA, Domínguez-Borbor C, Morales I, Ramírez M, Sonnenholzner S, Rodríguez J
2026
[A case of cerebellar-limited HIV-associated progressive multifocal leukoencephalopathy diagnosed with the aid of the shrimp sign].
Ojio H, Kuroda T, Nohara T, Matsuoka K, Wada T, Murakami H
2026
Genomic and phylogenomic exploration of Vibrio cholerae strain SU129B isolated from Penaeus vannamei: Resistance, virulence, and evolutionary dynamics in bangladeshi aquaculture.
Uddin MS, Chamonara K, Masum MHU, Siddiqua A, Hossain I, Sultana S, Islam S
2026
Clinical significance and mechanistic study of SOX2-OT and miR-27b-3p expression in children with viral myocarditis.
Yang T, Wang W, Wang H
2026
The role of Surfactin, Skf/Sdp toxins, and phospholipids in the biocontrol ability of Bacillus subtilis JSHY-K3 against acute hepatopancreatic necrosis disease in shrimp aquaculture.
Zhou Z, Xiang L, Wang X, Jiang G, Cheng J, Hu Y, Qian J, Meng Q, Shen H
2026
Unveiling the hidden viral biodiversity and potential ecological functions with global coral holobiont virome database.
Wu M, Wen X, Liu S, Ngo HH, Cai Z, Zhou J
2026
Development and validation of TaqMan-based real-time PCR assays for translucent post larvae disease (TPD) detection in Penaeus vannamei.
Mai HN, Dinh-Hung N, Dhar AK
2026
Shellfish as a Potential Source of Hepatitis E Virus: Epidemiological Evidence, Biological Plausibility, and Research Gaps.
Okamoto H
2026
Amarilloviruses of Aquatic Animals.
Kibenge F, Kibenge M, Vargas D, Godoy M
2026
Genomic and phenotypic characterization of Vibrio cholerae strain SU109: a genomic investigation of a shrimp-associated strain from Bangladesh.
Chamonara K, Masum MHU, Uddin MS, Siddiqua A, Sultana S, Islam S
2026
Viral Community Profiling of RNA Viruses in Lesion Tissues From Hyriopsis cumingii With Epidemic Disease via Metatranscriptomics and VirID-Based RdRP Mining.
Ma M, Liu B, Zhou J, Zhang J, Zhang Y, Li W, Liu X, Xu D
2026
The crosstalk between acute hepatopancreatic necrosis disease (AHPND) and the Vibrio quorum sensing (QS) system: A review.
Wang HC, Kumar R, Ayenero ME, Hsu KC, Lo CF, Lin SJ, Wang HC
2026
Crustacean Mab21 proteins drive tissue-specific antiviral immunity by activating IKKε outside the canonical nucleic-acid sensing paradigm.
Li H, Li Q, Yang H, Wang X, Lv A, Di X, Wang R, Wang S, Yin B, He J, Li C
2026
Physiological and biochemical characterization of trypsin from Neocaridina denticulata sinensis and its roles in ontogenesis and immune response.
Feng D, Song Y, Wu Z, Liu W, Pu Y, Gao Y, Sun Y, Zhang J
2026
Single-cell transcriptomics of Pacific white shrimp (
Aldersey JE, Abernathy JW, Lange MD, García JC, Shoemaker CA, Beck BH
2026
Inhibition mechanism of linalool on Vibrio parahaemolyticus biofilms and its removal of biofilms on the surfaces of shrimp and its processing materials.
Zhao Z, Chen H, Chen W, Zhang M, Pei J, Lyu Y, He R, Chen W
2026

Geographic Distribution

No geographic distribution data available

Taxonomy Information

Family
Unclassified
Host Phylum
Arthropoda
Genome Type
dsDNA
Discovery Method
metagenomic_with_host_evidence

Related Isolates

Accession Length GC Completeness Country Year
ON550424 9,859 41.9 unknown N/A N/A

Sequence

Loading sequence...