MT980830
Genome And Source
Length
6,254
Type
dsDNA
GC%
40.0%
Completeness
unknown
Country
Madagascar
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
2
Hosts
1
Proteins
✓
Sequence
Related Viruses
No related viruses found.
Reference
Petabase-scale sequence alignment catalyses viral discovery
Edgar RC, Taylor J, Lin V, et al.
Nature 2022
PMID: 35058634
DOI: 10.1038/s41586-021-04332-2
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Amdoparvovirus carnivoran1 (Amdoparvovirus)
- Amdoparvovirus carnivoran10 (Amdoparvovirus)
- Amdoparvovirus carnivoran2 (Amdoparvovirus)
- Amdoparvovirus carnivoran3 (Amdoparvovirus)
- Amdoparvovirus carnivoran4 (Amdoparvovirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Pathogenicity terms found: lethal
pathogenicity · medium
Multiple WSSV genotypes associated with disease outbreaks in ponds seeded with uninfected postlarvae A transcriptome study on Macrobrachium rosenbergii hepatopancreas experimentally challenged with white spot syndrome virus (WSSV) White spot syndrome
pathogenicity · medium
parahaemolyticus challenge The Litopenaeus vannamei shrimp (body-weight; 1.0 ± 0.2 g) were purchased from Taikong Corporation (Taipei, Taiwan).
pathogenicity · medium
In Vivo Shrimp Challenge Test Firstly, the in vivo activity of AuraAqua against WSSV was performed to test its activity in preventing Penaeus vannamei post-larvae survival.
pathogenicity · medium
Effects of vitamin C on transport of Penaeus monodon A multi-biomarker approach to assess the impact of farming systems on black tiger shrimp (Penaeus monodon) Dietary values of Forsythia suspensa extract in Penaeus monodon under normal rearing and V
pathogenicity · medium
monodon individuals were challenged with a lethal dose of a gill associated virus, mortality was not reduced when fed with dsRNA-producing bacteria, while intramuscular dsRNA injections did lead to a decrease in mortality [99].
pathogenicity · medium
monodon Trx
(PmTrx) and WSSV IE1 after a challenge with WSSV.
AIMS: In this study we identified viral gene targets of the important redox regulator thioredoxin (Trx), and explored in depth how Trx interacts with the immediate early gene #1 (IE1) of the white spot syndrome virus (WSSV).
pathogenicity · medium
(2007)
Insights into the immune transcriptome of the shrimp Litopenaeus vannamei: tissue-
specific expression profiles and transcriptomic responses to immune challenge.
Pacific white shrimp (Litopenaeus vannamei) is the most extensively farmed crustacean species in the world.
pathogenicity · medium
monodon) which survived WSSV infection
during different challenge experiments over a period of
time and those surviving the natural infection were col-
lected for the analysis in the present study.
Viral latency has been recently observed to be associated with White spot syndrome virus (WSSV) infection in shrimp.
pathogenicity · medium
monodon post
WSSV challenge revealed its up regulation of PmUbc at
24 hpi.
pathogenicity · medium
Temperature
Investigating the microbial inactivation effect of low temperature high
pressure carbon dioxide and its application in frozen prawn
(Penaeus vannamei)
Zimeng Lian , Dong Yang , Yongtao Wang , Liang Zhao , Lei Rao *, Xiaojun Liao
College of Food S
temperature · medium
Thermal tolerance of Litopenaeus vannamei
(Crustacea: Penaeidae) acclimated to four temperatures.
temperature · medium
Oral delivery of WSSV hub dsRNA and WSSV challenge Shrimp Penaeus monodon (10 g body weight) were obtained from a local farm and were acclimatized in a wet laboratory in 1000 liters aquaria containing continuously aerated artificial seawater at 20 pp
temperature · medium
Prior to experimental challenges, naïve Pacific whiteleg shrimp Penaeus vannamei (2–5g
fresh weight) were purchased from local SPF shrimp broodstock producers and acclimated in
the laboratory for 2 days in 20 L artificial seawater (Marinium) at 20 pp
temperature · medium
Combined effects of temperature and salinity on critical thermal min-
ima of pacific white shrimp Litopenaeus vannamei (Crustacea: Penaeidae).
temperature · medium
Conventional White Shrimp Challenge Test
Before the challenge test, healthy white shrimp (Penaeus
vannamei; 4.6 ± 0.48 g) were transferred to 50 L seawater in
plastic tanks, and were acclimated for one week under the
following conditions: 30 shrimp/t
temperature · medium
Fulltext: thermal, degree
White spot syndrome virus (WSSV) is the most serious viral pathogen of cultured shrimp.
temperature · medium
Fulltext: thermal
Infectious hypodermal and hematopoietic necrosis virus (IHHNV) is one of the major viral pathogens of penaeid shrimps worldwide, which has resulted in severe mortalities of up to 90 % in cultured Penaeus (Litopenaeus) stylirostris from Hawaii and hence designated Penaeus stylirostris densovirus (PstDNV).
temperature · medium
Temperature data found: temperature, thermal, heat, °C
temperature · high
Temperature data found: temperature, degree
RNA interference (RNAi) is a powerful tool that can be used to specifically knock-down gene expression using double-stranded (dsRNA) effector molecules.
temperature · high
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (805 articles)
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2026
Direct LAMP for on-site rapid detection of Vibrio parahaemolyticus in shrimp (Litopenaeus vannamei) aquaculture water.
Pu X, Lu F, Yang Q, Han Z, Zhu X, Chen J, Zhang D, Zhang X
2026
Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing.
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2026
Whole genome and phylogenomic insights into Vibrio parahaemolyticus from Pacific White Shrimp reveal resistance and virulence traits in Bangladeshi aquaculture.
Masum MHU, Uddin MS, Chamonara K, Sultana S, Islam S, Siddiqua A
2026
De novo transcriptome assembly and annotation of Penaeus monodon hemocytes under WSSV infection and STAT knockdown.
Jatuyosporn T, Laohawutthichai P, Cornejo-Granados F, Gallardo-Becerra L, Tassanakajon A, Hurtado-Ramírez JM, Ochoa-Leyva A, Krusong K
2026
Native
Pazmiño-Gomez B, Rodas-Pazmiño K, Pazmiño-Pérez R, Tapia-Guijarro T, Balcazar-Quimi W, Valle-Asan S, Salazar-Vera S, Villalva-Vera M, Ochoa-Fajardo D, Rodas-Neira E
2026
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2026
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Li H, Li Q, Yang H, Wang X, Lv A, Di X, Wang R, Wang S, Yin B, He J, Li C
2026
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Feng D, Song Y, Wu Z, Liu W, Pu Y, Gao Y, Sun Y, Zhang J
2026
Single-cell transcriptomics of Pacific white shrimp (
Aldersey JE, Abernathy JW, Lange MD, García JC, Shoemaker CA, Beck BH
2026
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2026
Genome-based characterization of AHPND and non-AHPND
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2026
White spot syndrome virus IE1 protein hijacks the host pentose phosphate pathway to fuel viral replication.
Zhang J, Lu K, Zhu J, Aweya JJ, Zhang Y, Yao D
2026
Effect of the antimicrobial peptide BmKn2-7 in inhibiting Vibrio parahaemolyticus and its role in improving microbiota, immunity and Vibrio resistance in Litopenaeus vannamei.
Liang Q, Wang Q, Chi P, Fan D, Tan B, Xie S, Deng J, Liu H, Zeng L
2026
Combined Vibrio and nanoplastics stress promotes nanoplastic accumulation while reducing bacterial lethality in shrimp.
Zhong R, Fang X, Li C, Zheng B, Zhang G, Gong H, Yan M
2026
CRISPR-Cas12a-based lateral flow detection of white spot syndrome virus: a dual-target approach for detection of early and latent infection.
Manojkumar C, Limbola M, Paul S, Thangadurai K, Rajendran KV, Roy A, Mandal B, Jeena K, Bedekar MK.
2026
Experimental susceptibility of Macrobrachium rosenbergii (de Man) subadults and adults to infectious myonecrosis virus (IMNV)
da Silva SPA; Dos Santos FL; da Silva SMBC
2026
Decapod iridescent virus 1 (DIV1) enters hematopoietic Cherax quadricarinatus cells via caveola-mediated endocytosis in a pH-dependent manner
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2026
Modulating Whiteleg Shrimp (
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2025
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2025
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Kar P, Payra P, Pradhan S, Ghosh K
2025
Penaeus monodon fibrinogen-related lectin interacts with lipopolysaccharide and β-1,3-glucan binding protein to activate the innate immune system.
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2025
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Intriago P, Del Barco M, Vásquez MM, Montiel B, Villamar R
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Ammonia Stress Disrupts Intestinal Health in
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2025
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2025
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2025
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2025
Novel midgut smooth muscle necrosis (MSMN) in translucent or glass post-larvae of whiteleg shrimp.
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2025
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2025
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Managing
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Geographic Distribution
Madagascar
1 isolates
Taxonomy Information
Family
Parvoviridae
Host Phylum
Arthropoda
Genome Type
dsDNA
Discovery Method
metagenomic_survey
Related Isolates
Sequence
Loading sequence...