MK473877
Genome And Source
Length
11,231
Type
ssRNA
GC%
52.1%
Completeness
unknown
Country
United Kingdom
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
2
Hosts
1
Proteins
✓
Sequence
Related Viruses
No related viruses found.
Reference
Petabase-scale sequence alignment catalyses viral discovery
Edgar RC, Taylor J, Lin V, et al.
Nature 2022
PMID: 35058634
DOI: 10.1038/s41586-021-04332-2
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Guaicovirus culicis (Guaicovirus)
- Jingmenvirus rhipicephali (Jingmenvirus)
- Orthoflavivirus aphei (Orthoflavivirus)
- Orthoflavivirus apoiense (Orthoflavivirus)
- Orthoflavivirus aroaense (Orthoflavivirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Pathogenicity: mortality, lethal, challenge, experimental infection, pathogenicity
pathogenicity · high
Temperature
Expression and characterization of hepatitis B virus surface antigen polypeptides in insect cells with a baculovirus expression system Purification and characterization of Nipah virus nucleocapsid protein produced in insect cells Production and biome
temperature · medium
Temperature: temperature, water temperature
temperature · high
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (45 articles)
Host serum-circulating flavivirus NS1 co-opts mosquito miRNA processing to suppress early immune defense.
Li Y, Cui C, Ding J, Wang Y, Yun J, Li F, Wang S
2026
Comparison of two sentinel species
Lortholarie M, Do Nascimento J, Geffard A, Bonnard I, Gantzer C, Challant J, Bertrand I, Loutreul J, Boudaud N, Delorme N, Chaumot A, Geffard O, Palos Ladeiro M
2026
A Novel Crustavirus as a Candidate Aetiology of Tail Fan Necrosis in New Zealand Red Rock Lobsters, Jasus edwardsii.
Grimwood RM, Zamora LN, Darnley JA, Delisle L, Hutson KS, Hills J, Geoghegan JL
2026
Diversity and evolutionary history of RNA viruses among different horseshoe crab species.
Qi Y-H, Ye Z-X, Feng K-H, Ma X-W, Zhang C-X, Hu M-H, Shi M, Chen J-P, Li J-M
2025
Viral metagenomic investigation of two Caribbean echinoderms,
Hewson I, Brandt M, Budd K, Breitbart M, DeRito C, Gittens S, Henson MW, Hylkema A, Sevier M, Souza M, Vilanova-Cuevas B, Von Hoene S
2024
Transcriptomic evidence of a fourth mininucleovirus (Mininucleoviridae): A rapidly growing family among the Nucleo-Cytoplasmic Large DNA viruses (NCLDVs).
Burgess AL, Bojko J
2024
A novel tamanavirus (
Parry RH, Slonchak A, Campbell LJ, Newton ND, Debat HJ, Gifford RJ, Khromykh AA
2023
Transcriptome mining extends the host range of the
Mifsud JCO, Costa VA, Petrone ME, Marzinelli EM, Holmes EC, Harvey E
2023
Immune response, gene expression, and intestinal microbial composition of Pacific white shrimp fed with multispecies synbiotic for the prevention of coinfection disease.
Utomo AS, Yuhana M, Widanarni W, Afiff U
2023
Petabase-scale sequence alignment catalyses viral discovery
Edgar RC, Taylor J, Lin V, et al.
2022
First Discovery of Beta-Sitosterol as a Novel Antiviral Agent against White Spot Syndrome Virus.
Chen C, Shen JL, Liang CS, Sun ZC, Jiang HF
2022
Identification and Full Characterisation of Two Novel Crustacean Infecting Members of the Family
Bateman KS, Kerr R, Stentiford GD, Bean TP, Hooper C, Van Eynde B, Delbare D, Bojko J, Christiaens O, Taning CNT, Smagghe G, van Oers MM, van Aerle R
2021
Global mRNA and miRNA Analysis Reveal Key Processes in the Initial Response to Infection with WSSV in the Pacific Whiteleg Shrimp.
Millard RS, Bickley LK, Bateman KS, Farbos A, Minardi D, Moore K, Ross SH, Stentiford GD, Tyler CR, van Aerle R, Santos EM
2021
Mini Review: Virus Interference: History, Types and Occurrence in Crustaceans.
Escobedo-Bonilla CM
2021
A Novel Virus of
Dong X, Wang G, Hu T, Li J, Li C, Cao Z, Shi M, Wang Y, Zou P, Song J, Gao W, Meng F, Yang G, Tang KFJ, Li C, Shi W, Huang J
2021
Chimeric Virus-Like Particles of Prawn Nodavirus Displaying Hepatitis B Virus Immunodominant Region: Biophysical Properties and Cytokine Response.
Ninyio NN, Ho KL, Yong CY, Chee HY, Hamid M, Ong HK, Mariatulqabtiah AR, Tan WS
2021
An Unconventional Flavivirus and Other RNA Viruses in the Sea Cucumber (Holothuroidea; Echinodermata) Virome.
Hewson I, Johnson MR, Tibbetts IR
2020
A novel nudivirus infecting the invasive demon shrimp Dikerogammarus haemobaphes (Amphipoda).
Allain TW, Stentiford GD, Bass D, Behringer DC, Bojko J
2020
A New Family of DNA Viruses Causing Disease in Crustaceans from Diverse Aquatic Biomes.
Subramaniam K, Behringer DC, Bojko J, Yutin N, Clark AS, Bateman KS, van Aerle R, Bass D, Kerr RC, Koonin EV, Stentiford GD, Waltzek TB
2020
White Spot Syndrome Virus Establishes a Novel IE1/JNK/c-Jun Positive Feedback Loop to Drive Replication.
Wang S, Li H, Weng S, Li C, He J
2020
Spatial and temporal axes impact ecology of the gut microbiome in juvenile European lobster (Homarus gammarus).
Holt CC, van der Giezen M, Daniels CL, Stentiford GD, Bass D
2020
The first clawed lobster virus Homarus gammarus nudivirus (HgNV n. sp.) expands the diversity of the Nudiviridae.
Holt CC, Stone M, Bass D, Bateman KS, van Aerle R, Daniels CL, van der Giezen M, Ross SH, Hooper C, Stentiford GD
2019
Discovery of Novel Crustacean and Cephalopod Flaviviruses: Insights into the Evolution and Circulation of Flaviviruses between Marine Invertebrate and Vertebrate Hosts.
Parry R, Asgari S
2019
Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics.
Porter Ashleigh F; Shi Mang; Eden John-Sebastian; Zhang Yong-Zhen; Holmes Edward C
2019
Specific Molecular Signatures for Type II Crustins in Penaeid Shrimp Uncovered by the Identification of Crustin-Like Antimicrobial Peptides in Litopenaeus vannamei.
Barreto C, Coelho JDR, Yuan J, Xiang J, Perazzolo LM, Rosa RD
2018
‘Candidatus Aquirickettsiella gammari’ (Gammaproteobacteria: Legionellales: Coxiellaceae): A bacterial pathogen of the freshwater crustacean Gammarus fossarum (Malacostraca: Amphipoda)
Jamie Bojko; Alison M. Dunn; Paul Stebbing; Ronny van Aerle; Karolina Bącela‐Spychalska; Tim P. Bean; Ander Urrutia; Grant D. Stentiford
2018
The Mechanism of Synchronous Precise Regulation of Two Shrimp White Spot Syndrome Virus Targets by a Viral MicroRNA.
He Y, Ma T, Zhang X
2017
A white spot syndrome virus microRNA promotes the virus infection by targeting the host STAT.
Ren Q, Huang Y, He Y, Wang W, Zhang X
2015
G3BP1, G3BP2 and CAPRIN1 are required for translation of interferon stimulated mRNAs and are targeted by a dengue virus non-coding RNA.
Bidet K, Dadlani D, Garcia-Blanco MA
2014
Molecular archaeology of Flaviviridae untranslated regions: duplicated RNA structures in the replication enhancer of flaviviruses and pestiviruses emerged via convergent evolution.
Gritsun DJ, Jones IM, Gould EA, Gritsun TS
2014
A spatial modeling approach to predicting the secondary spread of invasive species due to ballast water discharge.
Sieracki JL, Bossenbroek JM, Chadderton WL
2014
Transcriptome analysis of the initial stage of acute WSSV infection caused by temperature change.
Sun Y, Li F, Sun Z, Zhang X, Li S, Zhang C, Xiang J
2014
Homology modeling and virtual screening for antagonists of protease from yellow head virus.
Unajak S, Sawatdichaikul O, Songtawee N, Rattanabunyong S, Tassnakajon A, Areechon N, Hirono I, Kondo H, Khunrae P, Rattanarojpong T, Choowongkomon K
2014
Baseline histopathological survey of a recently invading island population of 'killer shrimp', Dikerogammarus villosus.
Bojko J, Stebbing PD, Bateman KS, Meatyard JE, Bacela-Spychalska K, Dunn AM, Stentiford GD
2013
Susceptibility of juvenile European lobster Homarus gammarus to shrimp products infected with high and low doses of white spot syndrome virus.
Bateman KS, Munro J, Uglow B, Small HJ, Stentiford GD
2012
Susceptibility to infection and pathogenicity of White Spot Disease (WSD) in non-model crustacean host taxa from temperate regions.
Bateman KS, Tew I, French C, Hicks RJ, Martin P, Munro J, Stentiford GD
2012
Viral metagenomics: a tool for virus discovery and diversity in aquaculture.
Alavandi SV, Poornima M
2012
A dual role for hypoxia inducible factor-1α in the hepatitis C virus lifecycle and hepatoma migration.
Wilson GK, Brimacombe CL, Rowe IA, Reynolds GM, Fletcher NF, Stamataki Z, Bhogal RH, Simões ML, Ashcroft M, Afford SC, Mitry RR, Dhawan A, Mee CJ, Hübscher SG, Balfe P, McKeating JA
2012
Molecular cloning and characterisation of a pattern recognition protein, lipopolysaccharide and beta-1,3-glucan binding protein (LGBP) from Chinese shrimp Fenneropenaeus chinensis.
Liu F, Li F, Dong B, Wang X, Xiang J
2009
RNA transcription analysis and completion of the genome sequence of yellow head nidovirus.
Sittidilokratna Nusra; Dangtip Sirintip; Cowley Jeff A; Walker Peter J
2008
Seroepidemiology of arboviruses among seabirds and island residents of the Great Barrier Reef and Coral Sea.
Humphery-Smith I, Cybinski DH, Byrnes KA, St George TD
1991
The neurovirulence of flaviviruses in crab-eating monkeys (Macaca fascicularis).
Angsubhakorn S, Moe JB, Latendresse JR, Ward GS, Ngamprochana M, Sahaphong S, Bhamarapravati N
1986
The isolation of Saumarez Reef virus, a new flavivirus, from bird ticks Ornithodoros capensis and Ixodes eudyptidis in Australia.
St George TD, Standfast HA, Doherty RL, Carley JG, Fillipich C, Brandsma J
1977
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Geographic Distribution
United Kingdom
1 isolates
Taxonomy Information
Family
Flaviviridae
Host Phylum
Arthropoda
Genome Type
ssRNA
Discovery Method
metagenomic_survey
Related Isolates
Sequence
Loading sequence...