Southern pygmy squid flavivirus
MK473875
Genome Summary
Length
12,567
Type
ssRNA
GC%
N/A
Completeness
N/A
Country
Year
N/A
Key Hosts
1 total
Reference
Discovery of novel crustacean and cephalopod flaviviruses: insights into evolution and circulation of flaviviruses between marine invertebrate and vertebrate hosts
Parry,R. and Asgari,S.
J. Virol. (2019) In press 2019
ICTV Mapping
No species-level mapping. Family-level references:
- Guaicovirus culicis (Guaicovirus)
- Jingmenvirus rhipicephali (Jingmenvirus)
- Orthoflavivirus aphei (Orthoflavivirus)
- Orthoflavivirus apoiense (Orthoflavivirus)
- Orthoflavivirus aroaense (Orthoflavivirus)
Genome & Sequence
Length
12,567
Type
ssRNA
GC%
N/A
Completeness
N/A
Sequence data not available for this record.
Associated Hosts
1 species
Proteins
Loading protein data...
Reviewed Evidence
Only manual-checked evidence records are displayed. Candidate or inferred records are excluded.
Virulence / Pathogenicity
The challenge experiment data from this study were unable to determine the route of entry of MrGV into the hatchery system, as it was later determined that control animals were sourced from a hatchery assumed to be free of MrGV, but which after sampl
No value text
pathogenicity
medium
against lethal ammonia toxicity Thermal resistance, developmental rate and heat shock proteins in Artemia franciscana, from San Francisco Bay and Southern Vietnam Exposure of gnotobiotic Artemia franciscana larvae to abiotic stress increases heat sho
No value text
pathogenicity
medium
Pathogenicity of a baculovirus infection causing white spot syndrome in cultured penaeid shrimps in Taiwan A nonoccluded, systemic baculovirus that occurs in cells of ectodermal and mesodermal origin and causes high mortality in the black tiger prawn
No value text
pathogenicity
medium
Shellfish-Borne Viral Outbreaks: A Systematic Review Large concomitant outbreaks of acute gastroenteritis emergency visits in adults and food-borne events suspected to be linked to raw shellfish, France, December 2019 to January 2020 Outbreaks of Nor
No value text
pathogenicity
medium
Animals, immune challenge and tissue collection
97
Juvenile Pacific white shrimp (Litopenaeus vannamei) (10 ± 2 g) were obtained
98
from the Laboratory of Marine Shrimp of the Federal University of Santa Catarina
99
(Southern Brazil).
No value text
pathogenicity
medium
Temperature
Expression and characterization of hepatitis B virus surface antigen polypeptides in insect cells with a baculovirus expression system Purification and characterization of Nipah virus nucleocapsid protein produced in insect cells Production and biome
No value text
temperature
medium
against lethal ammonia toxicity Thermal resistance, developmental rate and heat shock proteins in Artemia franciscana, from San Francisco Bay and Southern Vietnam Exposure of gnotobiotic Artemia franciscana larvae to abiotic stress increases heat sho
No value text
temperature
medium
Shellfish-Borne Viral Outbreaks: A Systematic Review Large concomitant outbreaks of acute gastroenteritis emergency visits in adults and food-borne events suspected to be linked to raw shellfish, France, December 2019 to January 2020 Outbreaks of Nor
No value text
temperature
medium
Thermal resistance,
developmental rate and heat shock proteins in Artemia franciscana, from San
Francisco Bay and southern Vietnam.
No value text
temperature
medium
J Appl Physiol 94:43–52
PubMed CAS Google Scholar
• Clegg JS, Jackson SA, Hoa NV, Sorgeloos P (2000a) Thermal
resistance, developmental rate and heat shock proteins in Artemia
franciscana, from San Francisco Bay and Southern Vietnam.
No value text
temperature
medium
PCR
amplification products were confirmed by Southern blot hybridization with an
internal digoxigenin-labeled probe (5-TTAATTCCTGCAGGTTCAGG-3) at
40°C for 2 h in 5 SSC (1 SSC is 0.15 M NaCl plus 0.015 M sodium citrate) and
sequential washes down to
No value text
temperature
high
Freshly frozen squid
(Todarodes pacificus) were procured from domestic market
(Gyeongsan, South Korea), and transferred to the testing facilities
under refrigeration, and stored at a temperature of −20°C for the
purpose of conducting a biotic surface
No value text
temperature
high
Related Literature
208 articles
Loading literature data...
Geographic Distribution
Australia
1 isolates
Related Isolates
1 total
| Accession | Length | GC | Completeness | Country | Year |
|---|---|---|---|---|---|
| MK473875 | 12,567 | N/A | N/A | Australia | N/A |
Taxonomy Information
Family
Flaviviridae
Host Phylum
Mollusca
Genome Type
ssRNA
Discovery Method
metagenomic_survey