MF190040
Genome And Source
Length
4,953
Type
dsDNA
GC%
41.7%
Completeness
unknown
Country
United Kingdom
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
2
Hosts
1
Proteins
✓
Sequence
Related Viruses
No related viruses found.
Reference
Petabase-scale sequence alignment catalyses viral discovery
Edgar RC, Taylor J, Lin V, et al.
Nature 2022
PMID: 35058634
DOI: 10.1038/s41586-021-04332-2
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Amdoparvovirus carnivoran1 (Amdoparvovirus)
- Amdoparvovirus carnivoran10 (Amdoparvovirus)
- Amdoparvovirus carnivoran2 (Amdoparvovirus)
- Amdoparvovirus carnivoran3 (Amdoparvovirus)
- Amdoparvovirus carnivoran4 (Amdoparvovirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Poornima
123
Table 1 Discovery of viruses in humans, terrestrial and marine animals, plants and insects and understanding viral ecology using metagenomics
Objective
Finding
Reference
Discovery of viruses in human diseases
To develop a method for vir
Viruses are abundant biological entities on earth and the emergence of viral pathogens has become a serious threat to aquaculture and fisheries worldwide.
pathogenicity · medium
Survival of Pacific white shrimp Penaeus vannamei (0.4 ± 0.3 g of body weight) following immersion challenge with decapod hepanhamaparvovirus genotype V over 14 days (40 shrimp per group).
pathogenicity · medium
In New Caledonia, the Pacific blue shrimp
(Litopenaeus stylirostris) is a valuable farmed species
and represents an economical challenge for the
territory (Beliaeff et al., 2009).
pathogenicity · medium
Pathogenicity: challenge
pathogenicity · high
Fulltext: challenge
pathogenicity · high
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (111 articles)
Insights on Minimizing False Positives in IHHNV Detection: Experiences from Ecuador's
Intriago P, Del Barco M, Vásquez MM, Montiel B, Villamar R
2025
CNN-Based Identification of Pathogens of Concern in Shrimp.
Aung T, Vanichviriyakit R, Chayantrakom K, Amornsamankul S, Huabsomboon P
2025
A Metagenomic Survey of Virological Hazards in Market-Ready Oysters.
Dirks RAM, Sosef NP, Zwartkruis-Nahuis JTM, Thijssen MMA, Jansen CCC, Boxman ILA
2025
Multiplex CRISPR-Cas Assay for Rapid, Isothermal and Visual Detection of White Spot Syndrome Virus (WSSV) and Enterocytozoon hepatopenaei (EHP) in Penaeid Shrimp.
Kanitchinda S, Sritunyalucksana K, Chaijarasphong T
2025
Emergence of decapod hepanhamaparvovirus genotype V and its co-infection with <i>Enterocytozoon hepatopenaei</i> in cultured <i>Penaeus vannamei</i> in Thailand: Evidence from epidemiological, pathogenicity, and microbiome analyses.
Charoenwai O, Tanpichai P, Sukkarun P, Jeon HJ, Kim B, Han JE, Piamsomboon P.
2025
Simultaneous detection of five shrimp pathogens using a single-tube EvaGreen real-time PCR assay with differential melting temperature.
Lou H, Li X, Wang G, Zhang K, Wang K, Tang Q, Yang G, Jia P, Xiong J, Huang J, Dong X.
2025
Tracking the emergence of a novel genotype of Decapod hepanhamaparvovirus in shrimp using laser microdissection and next generation sequencing.
Cruz-Flores R, Dhar AK
2024
Updated roles of the gut microbiota in exploring shrimp etiology, polymicrobial pathogens, and disease incidence.
Xiong JB, Sha HN, Chen J.
2024
The structure and mechanism of action of a distinct class of dicistrovirus intergenic region IRESs.
Abaeva IS, Young C, Warsaba R, Khan N, Tran LV, Jan E, Pestova TV, Hellen CUT
2023
Plasticity, Paralogy, and Pseudogenization: Rhabdoviruses of Freshwater Mussels Elucidate Mechanisms of Viral Genome Diversification and the Evolution of the Finfish-Infecting Rhabdoviral Genera.
Goldberg TL, Blevins E, Leis EM, Standish IF, Richard JC, Lueder MR, Cer RZ, Bishop-Lilly KA
2023
Limited cross-species virus transmission in a spatially restricted coral reef fish community.
Costa VA, Bellwood DR, Mifsud JCO, Van Brussel K, Geoghegan JL, Holmes EC, Harvey E
2023
A remarkably diverse and well-organized virus community in a filter-feeding oyster.
Jiang JZ, Fang YF, Wei HY, Zhu P, Liu M, Yuan WG, Yang LL, Guo YX, Jin T, Shi M, Yao T, Lu J, Ye LT, Shi SK, Wang M, Duan M, Zhang DC
2023
Petabase-scale sequence alignment catalyses viral discovery
Edgar RC, Taylor J, Lin V, et al.
2022
Viral Capsid Change upon Encapsulation of Double-Stranded DNA into an Infectious Hypodermal and Hematopoietic Necrosis Virus-like Particle.
Weerachatyanukul W, Kiatmetha P, Raksat P, Boonkua S, Thongsum O, Jariyapong P, Chotwiwatthanakun C, Ounjai P, Metlagel Z
2022
Rapid sample preparation and low-resource molecular detection of hepatopancreatic parvoviruses (HPV) by recombinase polymerase amplification lateral flow detection assay in shrimps (Fenneropenaeus merguiensis).
Pollak NM, Fais O, Kristoffersen J, Phuthaworn C, Knibb W, Macdonald J
2022
Current status of infection with infectious hypodermal and hematopoietic necrosis virus (IHHNV) in the Peruvian and Ecuadorian shrimp industry.
Aranguren Caro LF, Gomez-Sanchez MM, Piedrahita Y, Mai HN, Cruz-Flores R, Alenton RRR, Dhar AK
2022
Shrimp genome sequence contains independent clusters of ancient and current Endogenous Viral Elements (EVE) of the parvovirus IHHNV.
Taengchaiyaphum S, Wongkhaluang P, Sittikankaew K, Karoonuthaisiri N, Flegel TW, Sritunyalucksana K
2022
Usefulness of the pancreas as a prime target for histopathological diagnosis of Tilapia parvovirus (TiPV) infection in Nile tilapia, Oreochromis niloticus.
Dong HT, Sangpo P, Dien LT, Mai TT, Linh NV, Del-Pozo J, Salin KR, Senapin S
2022
Iron Regulatory Protein 1 Inhibits Ferritin Translation Responding to OsHV-1 Infection in Ark Clams,
Huang B, Zhang X, Liu Q, Bai C, Li C, Wang C, Xin L
2022
Genetic Relatedness of Infectious Hypodermal and Hematopoietic Necrosis Virus Isolates, United States, 2019.
Dhar AK, Cruz-Flores R, Warg J, Killian ML, Orry A, Ramos J, Garfias M, Lyons G
2022
Investigation of Pathogenic Mechanism of Covert Mortality Nodavirus Infection in Penaeus vannamei
Shuang Liu; Jitao Xia; Yuan Tian; Liang Yao; Tingting Xu; Xupeng Li; Xiaoping Li; Wei Wang
2022
Potential lineage transmission within the active microbiota of the eggs and the nauplii of the shrimp
Giraud C, Callac N, Beauvais M, Mailliez JR, Ansquer D, Selmaoui-Folcher N, Pham D, Wabete N, Boulo V
2021
Mini Review: Virus Interference: History, Types and Occurrence in Crustaceans.
Escobedo-Bonilla CM
2021
Establishing a gold standard method for the detection of Cherax reovirus using reverse transcriptase, quantitative, polymerase chain reaction.
Jaroenram W, Hayakijkosol O, Owens L, Elliman J
2021
Small Molecule Inhibitors of White Spot Syndrome Virus: Promise in Shrimp Seedling Culture.
Liu L, Shan LP, Zhou Y, Chen J
2021
First detection of canine parvovirus 2b DNA in a crab-eating fox pup (Cerdocyon thous, Linnaeus, 1766).
Spera CG, Lavorente FLP, Lorenzetti E, de Calasans Marques G, de Almeida Freitas L, Martins MB, Teixeira CR, Alfieri AA, Alfieri AF
2021
Shrimp Parvovirus Circular DNA Fragments Arise From Both Endogenous Viral Elements and the Infecting Virus.
Taengchaiyaphum S, Buathongkam P, Sukthaworn S, Wongkhaluang P, Sritunyalucksana K, Flegel TW
2021
Virome Analysis of Signal Crayfish (Pacifastacus leniusculus) along Its Invasion Range Reveals Diverse and Divergent RNA Viruses
Bacnik,K., Kutnjak,D., Cerni,S., Bielen,A. and Hudina,S.
2021
Coral-Associated Viral Assemblages From the Central Red Sea Align With Host Species and Contribute to Holobiont Genetic Diversity.
Cárdenas A, Ye J, Ziegler M, Payet JP, McMinds R, Vega Thurber R, Voolstra CR
2020
Mass mortality in freshwater mussels (Actinonaias pectorosa) in the Clinch River, USA, linked to a novel densovirus.
Richard JC, Leis E, Dunn CD, Agbalog R, Waller D, Knowles S, Putnam J, Goldberg TL
2020
Virome of crab-eating (Cerdocyon thous) and pampas foxes (Lycalopex gymnocercus) from southern Brazil and Uruguay.
Weber MN, Mosena ACS, da Silva MS, Canova R, de Lorenzo C, Olegário JC, Budaszewski RF, Baumbach LF, Soares JF, Sonne L, Varela APM, Mayer FQ, de Oliveira LGS, Canal CW
2020
Fast, simple and highly specific molecular detection of Vibrio alginolyticus pathogenic strains using a visualized isothermal amplification method.
Dong Y, Zhao P, Chen L, Wu H, Si X, Shen X, Shen H, Qiao Y, Zhu S, Chen Q, Jia W, Dong J, Li J, Gao S
2020
dsRNA-seq Reveals Novel RNA Virus and Virus-Like Putative Complete Genome Sequences from Hymeniacidon sp. Sponge.
Urayama SI, Takaki Y, Hagiwara D, Nunoura T
2020
Diversity of single-stranded DNA containing viruses in shrimp.
Dhar AK, Cruz-Flores R, Caro LFA, Siewiora HM, Jory D
2019
Discovery of Novel Crustacean and Cephalopod Flaviviruses: Insights into the Evolution and Circulation of Flaviviruses between Marine Invertebrate and Vertebrate Hosts.
Parry R, Asgari S
2019
Conodipine-P1-3, the First Phospholipases A
Möller C, Davis WC, Clark E, DeCaprio A, Marí F
2019
Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics.
Porter Ashleigh F; Shi Mang; Eden John-Sebastian; Zhang Yong-Zhen; Holmes Edward C
2019
Bacterial biofilm development during experimental degradation of
Xaxiri NA, Nikouli E, Berillis P, Kormas KA
2018
Nanocontainer designed from an infectious hypodermal and hematopoietic necrosis virus (IHHNV) has excellent physical stability and ability to deliver shrimp tissues.
Kiatmetha P, Chotwiwatthanakun C, Jariyapong P, Santimanawong W, Ounjai P, Weerachatyanukul W
2018
Complete Genome Sequences of Four Major Viruses Infecting Marine Shrimp in Egypt.
Megahed ME, Cruz-Flores R, Dhar AK
2018
Mamastrovirus 5 detected in a crab-eating fox (Cerdocyon thous): Expanding wildlife host range of astroviruses.
Diniz Beduschi Travassos Alves C, da Fontoura Budaszewski R, Cibulski SP, Nunes Weber M, Quoos Mayer F, Viezzer Bianchi M, Zafalon-Silva B, Konradt G, Slaviero M, Sonne L, Driemeier D, Meller Alievi M, Wageck Canal C
2018
Metagenomic sequencing suggests a diversity of RNA interference-like responses to viruses across multicellular eukaryotes.
Waldron FM, Stone GN, Obbard DJ
2018
Green crab Carcinus maenas symbiont profiles along a North Atlantic invasion route.
Bojko J, Stebbing PD, Dunn AM, Bateman KS, Clark F, Kerr RC, Stewart-Clark S, Johannesen Á, Stentiford GD
2018
Current status of viral diseases in Indian shrimp aquaculture.
Tandel GM, John KR, Rosalind George M, Prince Jeyaseelan MJ
2017
Moderate heritability of hepatopancreatic parvovirus titre suggests a new option for selection against viral diseases in banana shrimp (Fenneropenaeus merguiensis) and other aquaculture species.
Phuthaworn C, Nguyen NH, Quinn J, Knibb W
2016
Exposure of Free-Ranging Wild Carnivores and Domestic Dogs to Canine Distemper Virus and Parvovirus in the Cerrado of Central Brazil.
Furtado MM, Hayashi EM, Allendorf SD, Coelho CJ, de Almeida Jácomo AT, Megid J, Ramos Filho JD, Silveira L, Tôrres NM, Ferreira Neto JS
2016
Loading additional literature...
Geographic Distribution
United Kingdom
1 isolates
Taxonomy Information
Family
Parvoviridae
Host Phylum
Echinodermata
Genome Type
dsDNA
Discovery Method
metagenomic_survey
Related Isolates
Sequence
Loading sequence...