Wenling crustacean virus 9

Picornavirales Arthropoda extended

KX884856

Genome And Source

Length
6,691
Type
ssRNA
GC%
39.2%
Completeness
unknown
Country
China
Year
N/A

📋 Data Provenance

🗄️
Source
GenBank / NCBI
🔗
Accession
KX884856
📁
Entry Type
partial_genome
🕒
Last Updated
N/A

Genome Browser

No ORF position data available for this genome.

Curation Status

6
Isolates
2
Hosts
1
Proteins
Sequence

Related Viruses

No related viruses found.

Reference

Redefining the invertebrate RNA virosphere.

Shi Mang; Lin Xian-Dan; Tian Jun-Hua; Chen Liang-Jun; Chen Xiao; Li Ci-Xiu; Qin Xin-Cheng; Li Jun; Cao Jian-Ping; Eden John-Sebastian; Buchmann Jan; Wang Wen; Xu Jianguo; Holmes Edward C; Zhang Yong-Zhen

Nature 2016

PMID: 27880757 DOI: 10.1038/nature20167

ICTV Mapping

No ICTV mapping is available or reviewed for this record.

Reviewed Evidence

Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.

Virulence / pathogenicity

One plausible approach to challenge this hypothesis would be to compare the expression and function of Ubx in association with the number of maxillipeds in different taxonomic groups of crustaceans.
pathogenicity · medium
Given that aquaculture is continuously faced with the challenge of identifying novel pathogenic viruses infecting different fish, crustaceans, and shellfish species, there is an urgent need to develop tools enabling those viruses to be sequenced eas
pathogenicity · medium
Based on the responses of shrimp and crayfish to the infection of white spot syndrome virus (WSSV) and the challenge of lipopolysaccharide (LPS), four types of immune hemocytes of crustaceans were classified, including semi-granular hemocytes involved
pathogenicity · medium
(2001) Crustacean immunity: antifun- gal peptides are generated from the C-terminus of shrimp he- mocyanin in response to microbial challenge.
pathogenicity · medium
Crustaceans lack a true adap- tive immune system and instead rely on an innate immune response, in which hemocytes are one of the cellular effectors employed by crustaceans in a defense against pathogenic in- vasion (1, 22).
pathogenicity · medium
To isolate up-regulated genes in the freshwater crayfish Pacifastacus leniusculus, an alternative animal model for WSSV, SSH was used to compare genes expressed in the hemocytes of crayfish before and after WSSV challenge, since hemocytes are important
pathogenicity · medium
Although, multicellular organisms possess an ability to recognize and protect their selves against pathogenic bacteria and viruses called “immune system”, invertebrates such as insects and crustaceans do not own a long-term immunity of adaptive imm
pathogenicity · medium
This virus has been proven to be pathogenic to a wide range of temperate crustacean decapods, including the giant freshwater prawn or Macrobrachium rosenbergii (Corteel et al., 2012; Pradeep et al., 2012; Hameed et al., 2003; Kiran et al., 2002).
pathogenicity · medium
Pathogenicity of a baculovirus infection causing white spot syndrome in cultured penaeid shrimps in Taiwan A nonoccluded, systemic baculovirus that occurs in cells of ectodermal and mesodermal origin and causes high mortality in the black tiger prawn
pathogenicity · medium
In crustaceans, after WSSV challenge, the expression of CTLs is greatly affected.
pathogenicity · medium

Temperature

Defense parameters Long‐term trends in oyster population dynamics in Delaware Bay: regime shifts and response to disease Susceptibility of testicular cell cultures of crab, Scylla serrata (Forskal) to white spot syndrome virus Research priorities for
temperature · medium
Temperature data found: °C
Carcinus maenas is in the top 100 globally invasive species and harbours a wide diversity of pathogens, including viruses.
temperature · high
Temperature: °C
temperature · high
Fulltext: °C
temperature · high

Diagnostic And Control Records

No curated diagnostic or control records are available for this virus.

Proteins

🧬

No protein annotations available

Related Literature (324 articles)

Genomic and phylogenetic characterization of a bunya-like virus from the freshwater Chinese mitten crab Eriocheir sinensis
Shen,H., Huang,P. and Zhang,X.
unknown
DOI
Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing.
Florea A, Wade N, Salisbury SJ, Furniss J, Fraslin C, Chapuis A, Sullivan K, Stewart R, Robledo D, Bean TP
2026
Insect SVWC Proteins: A Diverse Cytokine-like Family Orchestrating Multilayered Antiviral and Antibacterial Immunity.
Chen Y, Xu G, Wang J, Zhang C, Abubakar AY, Xia H
2026
De novo transcriptome assembly and annotation of Penaeus monodon hemocytes under WSSV infection and STAT knockdown.
Jatuyosporn T, Laohawutthichai P, Cornejo-Granados F, Gallardo-Becerra L, Tassanakajon A, Hurtado-Ramírez JM, Ochoa-Leyva A, Krusong K
2026
Amarilloviruses of Aquatic Animals.
Kibenge F, Kibenge M, Vargas D, Godoy M
2026
Physiological and biochemical characterization of trypsin from Neocaridina denticulata sinensis and its roles in ontogenesis and immune response.
Feng D, Song Y, Wu Z, Liu W, Pu Y, Gao Y, Sun Y, Zhang J
2026
Combined Vibrio and nanoplastics stress promotes nanoplastic accumulation while reducing bacterial lethality in shrimp.
Zhong R, Fang X, Li C, Zheng B, Zhang G, Gong H, Yan M
2026
De novo transcriptome assembly of hemocytes from Haliotis discus hannai following poly(I:C) stimulation.
Yoo SH, Kim JG, Lee HE, Park YJ, Seo YB, Jo MJ, Kim JO, Kim GD
2026
A Novel Crustavirus as a Candidate Aetiology of Tail Fan Necrosis in New Zealand Red Rock Lobsters, Jasus edwardsii.
Grimwood RM, Zamora LN, Darnley JA, Delisle L, Hutson KS, Hills J, Geoghegan JL
2026
CRISPR-Cas12a-based lateral flow detection of white spot syndrome virus: a dual-target approach for detection of early and latent infection.
Manojkumar C, Limbola M, Paul S, Thangadurai K, Rajendran KV, Roy A, Mandal B, Jeena K, Bedekar MK.
2026
Prevalence, Virulence and Antimicrobial Resistance of
Li Y, Liu J, Yang X, Lan W, Zhao Y, Sun X
2025
WSSV-induced reversal of the malate-aspartate shuttle facilitates viral replication in shrimp hemocytes.
Guo FJ, Huang KL, Chen CY, Cheng SW, Ng YS, Wang HC
2025
The Regulatory Effect and Molecular Mechanism of the Anti-Lipopolysaccharide Factor-like Gene on the Resistance of Shrimp (
Yang B, Zhang L, Fu F, Luo K, Luan S, Kong J, Fu Q, Cao J, Chen B, Dai P, Xing Q, Li X, Meng X
2025
MAP3K15 facilitates multiple viral genes expression in crustaceans via Dorsal-CC-CL-STAT axis besides the JNK/P38 pathway.
Ran XQ, Liu CC, Xu XM, Wu XM, Kang CJ
2025
Integrated transcriptomic and microbiomic analyses reveal mechanisms of Decapod iridescent virus 1 resistance in
Hao J, Jie Y, Lu Z, Ye T, Meng J, Liu C, Yan J, Zheng Y, Dong Z, Gu Z
2025
microRNA-34 mediates a negative feedback loop in the JAK-STAT pathway to attenuate immune overactivation in an invertebrate.
Zuo H, Liao A, Shen S, Wang Y, Yang X, Weng S, He J, Xu X
2025
A novel approach for DNA extraction of white spot syndrome virus detection in penaeid shrimp.
Priya V, Sudhakaran R
2025
Temporal changes in the transcriptome profile of
Hao J, Jie Y, Lu Z, Ye T, Meng J, Liu C, Yan J, Zheng Y, Dong Z, Gu Z
2025
RNA virus diversity highlights the potential biosecurity threat posed by Antarctic krill
Tingting Xu; Xianyong Zhao; Thomas P. Loch; Jiancheng Zhu; Wei Wang; Xinliang Wang; Chong Wang; Gangzhou Fan
2025
DOI
Simultaneous detection of five shrimp pathogens using a single-tube EvaGreen real-time PCR assay with differential melting temperature.
Lou H, Li X, Wang G, Zhang K, Wang K, Tang Q, Yang G, Jia P, Xiong J, Huang J, Dong X.
2025
Combating White Spot Syndrome Virus (WSSV) in Global Shrimp Farming: Unraveling Its Biology, Pathology, and Control Strategies.
Iftehimul M, Hasan NA, Bass D, Bashar A, Haque MM, Santi M.
2025
Impact of Biochar Addition on Biofloc Nitrifying Bacteria and Inorganic Nitrogen Dynamics in an Intensive Aquaculture System of Shrimp.
Xu W, Zhang D, Su H, Xu Y, Hu X, Wen G, Cao Y
2024
Comparative transcriptomic and molecular biology analyses to explore potential immune responses to
Chen D, Xin Y, Teng J, Zhao X, Lu J, Li Y, Wang H
2024
Ecytonucleospora hepatopenaei (EHP) disease prevalence and mortality in Litopenaeus vannamei: a comparative study from Eastern India shrimp farms.
Kumar V, Das BK, Dhar S, Bisai K, Pande GSJ, Zheng X, Parida SN, Adhikari A, Jana AK
2024
Acute hypoxia stress mediates
He H, Huang S, Geng N, Weng S, He J, Li C
2024
Effects of dietary probiotic (
Yang W, Liang H, Chen R, Du Z, Deng T, Zheng Y, Song Y, Duan Y, Lin J, Bakky MAH, Tran NT, Zhang M, Li S
2024
Exosome-mediated viral nucleic acid presentation in a crustacean expounds innate immunity from a novel perspective.
Gong Y, Hu H, Zhao X, Wei W, Zhang M, Tran NT, Ma H, Zhang Y, Chan K-G, Li S
2024
Tracking the emergence of a novel genotype of Decapod hepanhamaparvovirus in shrimp using laser microdissection and next generation sequencing.
Cruz-Flores R, Dhar AK
2024
Diseases of marine fish and shellfish in an age of rapid climate change.
Rowley AF, Baker-Austin C, Boerlage AS, Caillon C, Davies CE, Duperret L, Martin SAM, Mitta G, Pernet F, Pratoomyot J, Shields JD, Shinn AP, Songsungthong W, Srijuntongsiri G, Sritunyalucksana K, Vidal-Dupiol J, Uren Webster TM, Taengchaiyaphum S, Wongwaradechkul R, Coates CJ
2024
A Chromosome-level genome assembly of giant river prawn (Macrobrachium rosenbergii).
Zheng Y, Guo G, Lv Y, Gao Q, Zhou D, Zhang L, Tu G, Weng S, Li C, He J, Wang M
2024
Effects of Microplastic Exposure against White Spot Syndrome Virus Infection in Pacific White Shrimp (
Jeon HJ, Seo S, Lee C, Kim B, Piamsomboon P, Kim JH, Han JE
2024
Morinda citrifolia fruit extract enhances the resistance of Penaeus vannamei to Vibrio parahaemolyticus infection.
Moh JHZ, Okomoda VT, Mohamad N, Waiho K, Noorbaiduri S, Sung YY, Manan H, Fazhan H, Ma H, Abualreesh MH, Ikhwanuddin M
2024
Molecular docking and dynamics simulation studies uncover the host-pathogen protein-protein interactions in Penaeus vannamei and Vibrio parahaemolyticus.
Rosilan NF, Jamali MAM, Sufira SA, Waiho K, Fazhan H, Ismail N, Sung YY, Mohamed-Hussein ZA, Hamid AAA, Afiqah-Aleng N
2024
Characteristics and pathogenicity of Vibrio alginolyticus SWS causing high mortality in mud crab (Scylla serrata) aquaculture in Hong Kong.
Kwok CT, Yu RC, Hau PT, Cheung KY, Ng IC, Fung J, Wong IT, Yau MC, Liu WM, Kong HK, Siu GK, Chow FW, Seto SW.
2024
Development and application of a quantitative real-time PCR method for detection of Decapod iridescent virus 1.
Unknown (pending verification)
2024
A Mannose Receptor from
Guo N, Liu Y, Hao Q, Sun M, Li F
2023
Comparative transcriptomic analysis of gill reveals genes belonging to mTORC1 signaling pathway associated with the resistance trait of shrimp to VP
Liu Y, Yu Y, Li S, Sun M, Li F
2023
Exploring the Effect of Functional Diets Containing Phytobiotic Compounds in Whiteleg Shrimp Health: Resistance to Acute Hepatopancreatic Necrotic Disease Caused by
Hernández-Cabanyero C, Carrascosa E, Jiménez S, Fouz B
2023
Modulation of SREBP Expression and Fatty Acid Levels by Bacteria-Induced ER Stress Is Mediated by Hemocyanin in Penaeid Shrimp.
Huang Z, Zheng X, Chen Z, Zheng Z, Yao D, Yang S, Zhang Y, Aweya JJ
2023
The structure and mechanism of action of a distinct class of dicistrovirus intergenic region IRESs.
Abaeva IS, Young C, Warsaba R, Khan N, Tran LV, Jan E, Pestova TV, Hellen CUT
2023
Virome Analysis Provides an Insight into the Viral Community of Chinese Mitten Crab
Guo G, Wang M, Zhou D, He X, Han P, Chen G, Zeng J, Liu Z, Wu Y, Weng S, He J
2023
Evaluation of the Horizontal Transmission of White Spot Syndrome Virus for Whiteleg Shrimp (
Kim MJ, Kim JO, Jang GI, Kwon MG, Kim KI
2023
PcTrim prevents early infection with white spot syndrome virus by inhibiting AP1-induced endocytosis.
Cao XT, Wu LJ, Xu FL, Li XC, Lan JF
2023
In silico screening of chalcones and flavonoids as potential inhibitors against yellow head virus 3C-like protease.
Boonthaworn K, Hengphasatporn K, Shigeta Y, Chavasiri W, Rungrotmongkol T, Ounjai P
2023
Multiple Nucleocapsid Structural Forms of Shrimp White Spot Syndrome Virus Suggests a Novel Viral Morphogenetic Pathway.
Huang HJ, Tang SL, Chang YC, Wang HC, Ng TH, Garmann RF, Chen YW, Huang JY, Kumar R, Chang SH, Wu SR, Chao CY, Matoba K, Kenji I, Gelbart WM, Ko TP, Wang HA, Lo CF, Chen LL, Wang HC
2023
The structure of a 12-segmented dsRNA reovirus: New insights into capsid stabilization and organization.
Zhang Q, Gao Y, Baker ML, Liu S, Jia X, Xu H, He J, Kaelber JT, Weng S, Jiang W
2023
Intestinal microbiome in crayfish: Its role upon growth and disease presentation.
Hernández-Pérez A, Söderhäll I
2023
Untitled
Nambiar G, Owens L, Elliman J
2023
Artificial shelters and marine infectious disease: no detectable effect of the use of casitas to enhance juvenile
Candia-Zulbarán R, Briones-Fourzán P, Negrete-Soto F, Barradas-Ortiz C, Lozano-Álvarez E
2023
Limited cross-species virus transmission in a spatially restricted coral reef fish community.
Costa VA, Bellwood DR, Mifsud JCO, Van Brussel K, Geoghegan JL, Holmes EC, Harvey E
2023

Geographic Distribution

China 3 isolates

Taxonomy Information

Family
Picornavirales
Host Phylum
Arthropoda
Genome Type
ssRNA
Discovery Method
metagenomic_survey

Related Isolates

Accession Length GC Completeness Country Year
KX884856 6,691 39.2 unknown China N/A
KX884857 3,267 38.6 unknown China N/A
KX884858 799 44.2 unknown China N/A
NC_032143 6,691 39.2 unknown N/A N/A
NC_032144 3,267 38.6 unknown N/A N/A
NC_032145 799 44.2 unknown N/A N/A

Sequence

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