KX158876
Genome And Source
Length
N/A
Type
ssRNA
GC%
N/A
Completeness
metadata_only
Country
Italy
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
2
Isolates
2
Hosts
1
Proteins
—
Sequence
Related Viruses
No related viruses found.
Reference
A bioinformatics approach reveals seven nearly-complete RNA-virus genomes in bivalve RNA-seq data.
Rosani U, Gerdol M
Virus research 2017
PMID: 27769778
DOI: 10.1016/j.virusres.2016.10.009
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Avihepevirus egretti (Avihepevirus)
- Avihepevirus magniiecur (Avihepevirus)
- Chirohepevirus desmodi (Chirohepevirus)
- Chirohepevirus eptesici (Chirohepevirus)
- Chirohepevirus rhinolophi (Chirohepevirus)
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Genomic characterization of the 2019 novel human-pathogenic coronavirus isolated from a patient with atypical pneumonia after visiting Wuhan Gastrointestinal Manifestations of SARS-CoV-2 Infection and Virus Load in Fecal Samples From a Hong Kong Coho
pathogenicity · medium
Molluscan cells in culture: Primary cell cultures and cell lines Detection and Description of a Particular Ostreid Herpesvirus 1 Genotype Associated with Massive Mortality Outbreaks of Pacific oysters, Crassostrea gigas, in France in 2008 Identificat
pathogenicity · medium
Causation and disease: the Henle-Koch postulates revisited Development of a PCR procedure for the detection of a herpes-like virus infecting oysters in France Council Directive 95/70/EC of 22 December 1995 introducing minimum Community measures for t
Since its molecular characterisation, Ostreid herpesvirus 1 (OsHV-1) has been regularly detected in Crassostrea gigas in France.
pathogenicity · medium
Real-time RT-PCR for norovirus screening in shellfish Transmission of viruses through shellfish: When specific ligands come into play Hemocytes are sites of enteric virus persistence within oysters Molecular epidemiology of norovirus gastroenteritis
pathogenicity · medium
Download spectrum.00161-22-s0001.pdf, PDF file, 0.1 MB Improving the efficacy of sewage treatment decreases norovirus contamination in oysters Foodborne and food-handler norovirus outbreaks: a systematic review More than 1,000 sick in France from con
pathogenicity · medium
nov., the causal agent of nocardiosis in Pacific oysters Investigation of the relationship between the presence of a Gram-positive bacterial infection and summer mortality of the Pacific oyster, Crassostrea gigas Thunberg Bacteriological Studies on t
pathogenicity · medium
Protective effect of four potential probiotics against pathogen-challenge of the larvae of three bivalves: Pacific oyster (Crassostrea gigas), flat oyster (Ostrea edulis) and scallop (Pecten maximus).
pathogenicity · medium
conicopora) are susceptible to infection by multiple abalone herpesvirus genotypes Development of a polymerase chain reaction for the detection of abalone herpesvirus infection based on the DNA polymerase gene Exploring the chronic mortality affectin
pathogenicity · medium
Additionally, outbreak investigations and human
challenge studies consistently document norovirus’s high infectivity and resistance in food
and water, particularly via bivalve shellfish accumulation of virus from contaminated
waters [49].
pathogenicity · medium
Protective effect of four potential probiotics against pathogen-challenge of the
larvae of three bivalves: Pacific oyster (Crassostrea gigas), flat oyster (Ostrea edulis) and scallop (Pecten maximus).
pathogenicity · medium
Temperature
► Challenged oysters exhibited an increased glycolysis and VDAC accumulation, which
reflect a “Warburg effect.”
Abbreviations
OsHV-1 μVar, ostreid herpes virus 1 microvariant ;
MS, mass spectrometry ;
HPLC, high performance liquid c
temperature · medium
Causation and disease: the Henle-Koch postulates revisited Development of a PCR procedure for the detection of a herpes-like virus infecting oysters in France Council Directive 95/70/EC of 22 December 1995 introducing minimum Community measures for t
Since its molecular characterisation, Ostreid herpesvirus 1 (OsHV-1) has been regularly detected in Crassostrea gigas in France.
temperature · medium
Shellfish-Borne Viral Outbreaks: A Systematic Review Large concomitant outbreaks of acute gastroenteritis emergency visits in adults and food-borne events suspected to be linked to raw shellfish, France, December 2019 to January 2020 Outbreaks of Nor
temperature · medium
Pertinent examples of pathogens and parasites affecting marine aquaculture and their temperature ranges, optimal conditions, and critical
thresholds affecting their environmental survival
Disease
Pathogen/Parasite
(taxonomy)
Hosts
Temperature
range (
temperature · medium
Temperature data found: temperature, heat
temperature · high
in oysters (Tiostrea chilensis), with a consideration of organelle function Replication of a herpes-like virus in larvae of the flat oyster Tiostrea chilensis at ambient temperatures Herpes-like virus infecting Pacific-oyster larvae, Creassostrea gig
In 2008 and 2009, acute mortalities occurred in France among Pacific cupped oyster, Crassostrea gigas, spat.
temperature · high
These variations in UI are small (±2%) compared to those that can occur in response to a change of temperature in bivalves (∼20% when ΔT°C=20°C; Pernet et al., 2007).
temperature · high
The degree of cooking to
reach an internal temperature of 90 °C for 90 seconds
as required by EU legislation for commercial heat treat-
ment [21], which has been shown to reliably inactivate
HAV [22], may however render bivalve molluscs unpal-
ata
temperature · high
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
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Geographic Distribution
Italy
1 isolates
Taxonomy Information
Family
Hepeviridae
Host Phylum
Mollusca
Genome Type
ssRNA
Discovery Method
metagenomic_survey