HQ246150
Genome And Source
Length
N/A
Type
dsDNA
GC%
N/A
Completeness
metadata_only
Country
N/A
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
9
Isolates
2
Hosts
1
Proteins
—
Sequence
Related Viruses
No related viruses found.
Reference
Genetic variation and virulence of nucleopolyhedroviruses isolated worldwide from the heliothine pests Helicoverpa armigera, Helicoverpa zea, and Heliothis virescens
Rowley,D.L., Popham,H.J. and Harrison,R.L.
J. Invertebr. Pathol. 107 (2), 112-126 (2011) 2011
PMID: 21439295
ICTV Mapping
No ICTV mapping is available or reviewed for this record.
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Virulence / pathogenicity
Poornima
123
Table 1 Discovery of viruses in humans, terrestrial and marine animals, plants and insects and understanding viral ecology using metagenomics
Objective
Finding
Reference
Discovery of viruses in human diseases
To develop a method for vir
Viruses are abundant biological entities on earth and the emergence of viral pathogens has become a serious threat to aquaculture and fisheries worldwide.
pathogenicity · medium
Figure 2a shows that a single dsRNA
dose administered 72 h before viral challenge protects shrimp
against WSSV to a similar extent as two applications of dsRNA
(72 h before infection and injection of virus-dsRNA mixtures).
pathogenicity · medium
This evidences that the Summer Syndrome is most probably
attributable to a single pathogenic clone, surviving from one year to the next in the shrimp farm
environment then re-developing inside the grow out system at the next crop.
pathogenicity · medium
These data led us to hypothesize that
the summer syndrome is attributable to a single pathogenic clone
surviving from one year to the next in the shrimp farm environ-
ment and then redeveloping inside the grow-out system at the
next farming cycle.
pathogenicity · medium
The death of animals in
treatment groups was confirmed to have been caused by
WSSV using Single Tube WSSV detection kit (Bangalore
Genei, India) and histopathology [12].
pathogenicity · medium
To better understand how corals respond to immune challenge, we exposed single colonies of A.
BACKGROUND: As a step towards understanding coral immunity we present the first whole transcriptome analysis of the acute responses of Acropora millepora to challenge with the bacterial cell wall derivative MDP and the viral mimic poly I:C, defined immunogens provoking distinct but well characterised responses in higher animals.
pathogenicity · medium
against lethal ammonia toxicity Thermal resistance, developmental rate and heat shock proteins in Artemia franciscana, from San Francisco Bay and Southern Vietnam Exposure of gnotobiotic Artemia franciscana larvae to abiotic stress increases heat sho
Non-lethal heat shock boosts bacterial and viral disease tolerance in shrimp, possibly due to increases in endogenous heat shock protein 70 (Hsp70) and/or immune proteins.
pathogenicity · medium
Spatial and temporal distribution of Escherichia coli on beef trimmings obtained from a beef packing plant Biofilm formation and sanitizer resistance of Escherichia coli O157: H7 strains isolated from “high event period” meat contamination Escherichi
pathogenicity · medium
Aquaculture: Global status and trends Historic emergence, impact and current status of shrimp pathogens in Asia Challenges in shrimp aquaculture due to viral diseases: Distribution and biology of the five major penaeid viruses and interventions to av
pathogenicity · medium
Protein synthesis in cells infected by Chilo iridiscent virus: evidence for temporal control of three classes of induced polypeptides Arginine-glycine-aspartic acid motif is critical for human parechovirus 1 entry Temporal and differential gene expre
pathogenicity · medium
Temperature
Spatial and temporal distribution of Escherichia coli on beef trimmings obtained from a beef packing plant Biofilm formation and sanitizer resistance of Escherichia coli O157: H7 strains isolated from “high event period” meat contamination Escherichi
temperature · medium
viridis incorporated a clutch weight value based on the dimensions of a single egg sac from a female collected at an unrecorded temperature in South Germany, female body weight data from a population in South Germany, and embryonic development time d
temperature · medium
qPCR analysis of the distribution of NdTryp in
different tissues and during shrimp ontogenesis
The melt curve analysis revealed a single peak for the NdTryp gene,
indicating the qPCR product has a high degree of specific
amplification.
temperature · medium
A dissociation curve with a single peak was
obtained for the IHHNV-challenged-shrimp samples (melting
temperature [Tm] 5 76.2°C) but not for the healthy-shrimp
samples.
A rapid and highly sensitive real-time PCR detection and quantification method for infectious hypodermal and hematopoietic necrosis virus (IHHNV), a single-stranded DNA virus, and white spot virus (WSV), a double-stranded DNA (dsDNA) virus infecting penaeid shrimp (Penaeus sp.), was developed using the GeneAmp 5700 sequence detection system coupled with SYBR Green chemistry.
temperature · high
A
dissociation curve with a single peak at the expected melting
temperature (Tm 76.0°C) indicated the amplification of
WSV target only.
Subsequently full-length cDNA was cloned by the 5'-RACE (rapid amplification of cDNA ends) technique and sequenced.
temperature · high
A melting curve of PCR products (60 to 95°C) was
performed to ensure the detection of a single specific product.
Molecular characterization and phylogenic analysis of 3 immune-related genes (macrophage expressed protein, multicopper oxidase and immunoglobulin domain cell adhesion molecule) were performed.
temperature · high
Melting curves were also
plotted (55-95°C) in order to ensure that a single PCR
product was amplified for each set of primers.
temperature · high
One-step RT-PCR
allowed the continuous reactions of RT at 45°C (15 min), Taq enzyme activation
at 95°C (15 min), and the first PCR (Table 1) to occur in a single microtube.
temperature · high
Oysters were placed in the Ifremer’s facilities (Laboratoire de
Génétique et Pathologie, La Tremblade, France) in a single tank of 200 L of filtered (1 µm)
seawater and slowly acclimated to 22°C increasing the temperature of 1°C/day.
temperature · high
Oysters were placed in the Ifremer's facilities (Laboratoire de Génétique et Pathologie, La Tremblade, France) in a single tank of 200 L containing filtered (1 μm) seawater and slowly acclimated to 22°C increasing the temperature of 1°C per day.
In 2008 and 2009, acute mortalities occurred in France among Pacific cupped oyster, Crassostrea gigas, spat.
temperature · high
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
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Loading additional literature...
Geographic Distribution
United States
1 isolates
Taxonomy Information
Family
Nucleocytoviricota
Host Phylum
Arthropoda
Genome Type
dsDNA
Discovery Method
metagenomic_survey
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