BK070343
Genome And Source
Length
N/A
Type
ssRNA
GC%
N/A
Completeness
metadata_only
Country
N/A
Year
N/A
📋 Data Provenance
Genome Browser
No ORF position data available for this genome.
Curation Status
1
Isolates
1
Hosts
1
Proteins
—
Sequence
Related Viruses
No related viruses found.
Reference
Giant RNA genomes: Roles of host, translation elongation, genome architecture, and proteome in nidoviruses
Neuman BW; Smart A; Gilmer O; Smyth RP; Vaas J; Böker N; Samborskiy DV; Bartenschlager R; Seitz S; Gorbalenya AE; Caliskan N; Lauber C
Proceedings of the National Academy of Sciences of the United States of America 2025
PMID: 39928875
DOI: 10.1073/pnas.2413675122
ICTV Mapping
No ICTV mapping is available or reviewed for this record.
Reviewed Evidence
Only manual-checked evidence records are displayed. Inferred records (without direct isolate linkage) are shown with a yellow badge.
Temperature
Physiological improvement
in
the
copepod
Eurytemora
affinis
through
thermal
and
multi-
generational
selection.
temperature · medium
Temperature data found: temperature, °C
temperature · high
Fulltext: temperature, °C
temperature · high
Hosts
Diagnostic And Control Records
No curated diagnostic or control records are available for this virus.
Proteins
🧬
No protein annotations available
Loading additional protein data...
Related Literature (46 articles)
Evolutionarily divergent nidovirus with an exceptionally large genome identified in Pacific oysters undergoing mass mortality.
Zhong KX, Chan AM, Miller KM, Saunders R, Suttle CA
2025
Viral Threats to Australian Fish and Prawns: Economic Impacts and Biosecurity Solutions-A Systematic Review.
Rahaman MM, Sharma B, Talukder S, Uddin MJ, Siddik MAB, Sarker S.
2025
Giant RNA genomes: Roles of host, translation elongation, genome architecture, and proteome in nidoviruses
Neuman BW; Smart A; Gilmer O; Smyth RP; Vaas J; Böker N; Samborskiy DV; Bartenschlager R; Seitz S; Gorbalenya AE; Caliskan N; Lauber C
2025
Expression dynamics of the aplysia abyssovirus.
Kron NS, Neuman BW, Kumar S, Blackwelder PL, Vidal D, Walker-Phelan DZ, Gibbs PDI, Fieber LA, Schmale MC
2024
Updated roles of the gut microbiota in exploring shrimp etiology, polymicrobial pathogens, and disease incidence.
Xiong JB, Sha HN, Chen J.
2024
In silico screening of chalcones and flavonoids as potential inhibitors against yellow head virus 3C-like protease.
Boonthaworn K, Hengphasatporn K, Shigeta Y, Chavasiri W, Rungrotmongkol T, Ounjai P
2023
Coinfection with Yellow Head Virus Genotype 8 (YHV-8) and Oriental Wenrivirus 1 (OWV1) in Wild
Qin J, Meng F, Wang G, Chen Y, Zhang F, Li C, Dong X, Huang J
2023
Petabase-scale sequence alignment catalyses viral discovery
Edgar RC, Taylor J, Lin V, et al.
2022
Simultaneous Production of a Virus-Like Particle Linked to dsRNA to Enhance dsRNA Delivery for Yellow Head Virus Inhibition.
Worawittayatada J, Angsujinda K, Sinnuengnong R, Attasart P, Smith DR, Assavalapsakul W
2022
The sORF-Encoded Peptides, ATP Synthase Subunits, Facilitate WSSV Duplication in Shrimp.
Huo LJ, Lu PY, Li DX, Shi XZ
2022
The Molecular Mechanism of Hemocyte Immune Response in
He Z, Zhao J, Chen X, Liao M, Xue Y, Zhou J, Chen H, Chen G, Zhang S, Sun C
2021
ICTV Virus Taxonomy Profile:
Walker PJ, Cowley JA, Dong X, Huang J, Moody N, Ziebuhr J, Consortium IR
2021
COVID-19-Zoonosis or Emerging Infectious Disease?
Haider N, Rothman-Ostrow P, Osman AY, Arruda LB, Macfarlane-Berry L, Elton L, Thomason MJ, Yeboah-Manu D, Ansumana R, Kapata N, Mboera L, Rushton J, McHugh TD, Heymann DL, Zumla A, Kock RA
2020
COVID-19 in Human, Animal, and Environment: A Review.
Swelum AA, Shafi ME, Albaqami NM, El-Saadony MT, Elsify A, Abdo M, Taha AE, Abdel-Moneim AE, Al-Gabri NA, Almaiman AA, Saleh Al-Wajeeh A, Tufarelli V, Staffa VN, Abd El-Hack ME
2020
A Novel RNA Virus, Macrobrachium rosenbergii Golda Virus (MrGV), Linked to Mass Mortalities of the Larval Giant Freshwater Prawn in Bangladesh.
Hooper C, Debnath PP, Biswas S, van Aerle R, Bateman KS, Basak SK, Rahman MM, Mohan CV, Islam HMR, Ross S, Stentiford GD, Currie D, Bass D
2020
Molecular evolution and phylogenetic analysis of SARS-CoV-2 and hosts ACE2 protein suggest Malayan pangolin as intermediary host.
Lopes LR, de Mattos Cardillo G, Paiva PB
2020
COVID-19 Coronavirus spike protein analysis for synthetic vaccines, a peptidomimetic antagonist, and therapeutic drugs, and analysis of a proposed achilles' heel conserved region to minimize probability of escape mutations and drug resistance.
Robson B
2020
Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins.
Lam TT, Jia N, Zhang YW, Shum MH, Jiang JF, Zhu HC, Tong YG, Shi YX, Ni XB, Liao YS, Li WJ, Jiang BG, Wei W, Yuan TT, Zheng K, Cui XM, Li J, Pei GQ, Qiang X, Cheung WY, Li LF, Sun FF, Qin S, Huang JC, Leung GM, Holmes EC, Hu YL, Guan Y, Cao WC
2020
Isolation and Characterization of Bacteria Colonizing
Zidour M, Chevalier M, Belguesmia Y, Cudennec B, Grard T, Drider D, Souissi S, Flahaut C
2017
Genome Sequence Analysis of CsRV1: A Pathogenic Reovirus that Infects the Blue Crab Callinectes sapidus Across Its Trans-Hemispheric Range.
Flowers EM, Bachvaroff TR, Warg JV, Neill JD, Killian ML, Vinagre AS, Brown S, Almeida AS, Schott EJ
2016
Comparative paleovirological analysis of crustaceans identifies multiple widespread viral groups.
Metegnier G, Becking T, Chebbi MA, Giraud I, Moumen B, Schaack S, Cordaux R, Gilbert C
2015
Immunological-based assays for specific detection of shrimp viruses.
Chaivisuthangkura P, Longyant S, Sithigorngul P
2014
Homology modeling and virtual screening for antagonists of protease from yellow head virus.
Unajak S, Sawatdichaikul O, Songtawee N, Rattanabunyong S, Tassnakajon A, Areechon N, Hirono I, Kondo H, Khunrae P, Rattanarojpong T, Choowongkomon K
2014
RNA-binding domain in the nucleocapsid protein of gill-associated nidovirus of penaeid shrimp.
Soowannayan C, Cowley JA, Michalski WP, Walker PJ
2011
Penaeus monodon is protected against gill-associated virus by muscle injection but not oral delivery of bacterially expressed dsRNAs.
Sellars MJ, Rao M, Arnold SJ, Wade NM, Cowley JA
2011
Impact of yellow head virus outbreaks in the whiteleg shrimp, Penaeus vannamei (Boone), in Thailand.
Senapin S; Thaowbut Y; Gangnonngiw W; Chuchird N; Sriurairatana S; Flegel T W
2010
Homologous genetic recombination in the yellow head complex of nidoviruses infecting Penaeus monodon shrimp.
Wijegoonawardane Priyanjalie K M; Sittidilokratna Nusra; Petchampai Natthida; Cowley Jeff A; Gudkovs Nicholas; Walker Peter J
2009
Non-virulence of a recombinant shrimp nidovirus is associated with its non structural gene sequence and not a large structural gene deletion.
Gangnonngiw Warachin; Anantasomboon Gun; Sang-oum Wiwat; Sriurairatana Siriporn; Sritunyalucksana Kallaya; Flegel Timothy W
2009
A virulent isolate of yellow head nidovirus contains a deformed envelope glycoprotein gp116.
Sittidilokratna Nusra; Chotwiwatthanakun Charoonroj; Wijegoonawardane Priyanjalie K M; Unajak Sasimanas; Boonnad Anutara; Wangnai Watcharakorn; Jitrapakdee Sarawut; Cowley Jeff A; Walker Peter J
2009
Low viral loads and lymphoid organ spheroids are associated with yellow head virus (YHV) tolerance in whiteleg shrimp Penaeus vannamei.
Anantasomboon G, Poonkhum R, Sittidilokratna N, Flegel TW, Withyachumnarnkul B
2008
Genetic diversity in the yellow head nidovirus complex.
Wijegoonawardane Priyanjalie K M; Cowley Jeff A; Phan Thuy; Hodgson Richard A J; Nielsen Linda; Kiatpathomchai Wansika; Walker Peter J
2008
RNA transcription analysis and completion of the genome sequence of yellow head nidovirus.
Sittidilokratna Nusra; Dangtip Sirintip; Cowley Jeff A; Walker Peter J
2008
Yellow head-like viruses affecting the penaeid aquaculture industry: a review.
Munro J, Owens L
2007
Characterization and diagnostic use of a recombinant single-chain antibody specific for the gp116 envelop glycoprotein of Yellow head virus.
Intorasoot S, Tanaka H, Shoyama Y, Leelamanit W
2007
Therapeutic inhibition of yellow head virus multiplication in infected shrimps by YHV-protease dsRNA.
Tirasophon W, Yodmuang S, Chinnirunvong W, Plongthongkum N, Panyim S
2007
Structural and antigenic analysis of the yellow head virus nucleocapsid protein p20.
Sittidilokratna N, Phetchampai N, Boonsaeng V, Walker PJ
2006
Identification and characterization of a Penaeus monodon lymphoid cell-expressed receptor for the yellow head virus.
Assavalapsakul Wanchai; Smith Duncan R; Panyim Sakol
2006
Antiserum to the gp116 glycoprotein of yellow head virus neutralizes infectivity in primary lymphoid organ cells of Penaeus monodon.
Assavalapsakul W, Tirasophon W, Panyim S
2005
The gene encoding the nucleocapsid protein of Gill-associated nidovirus of Penaeus monodon prawns is located upstream of the glycoprotein gene.
Cowley JA, Cadogan LC, Spann KM, Sittidilokratna N, Walker PJ
2004
Identification and analysis of gp116 and gp64 structural glycoproteins of yellow head nidovirus of Penaeus monodon shrimp.
Jitrapakdee S, Unajak S, Sittidilokratna N, Hodgson RAJ, Cowley JA, Walker PJ, Panyim S, Boonsaeng V
2003
The complete genome sequence of gill-associated virus of Penaeus monodon prawns indicates a gene organisation unique among nidoviruses.
Cowley JA, Walker PJ
2002
Complete ORF1b-gene sequence indicates yellow head virus is an invertebrate nidovirus.
Sittidilokratna Nusra; Hodgson Richard A J; Cowley Jeff A; Jitrapakdee Sarawut; Boonsaeng Vichal; Panyim Sakol; Walker Peter J
2002
Gill-associated nidovirus of Penaeus monodon prawns transcribes 3'-coterminal subgenomic mRNAs that do not possess 5'-leader sequences.
Cowley Jeff A; Dimmock Christine M; Walker Peter J
2002
Gill-associated virus of Penaeus monodon prawns: an invertebrate virus with ORF1a and ORF1b genes related to arteri- and coronaviruses.
Cowley JA, Dimmock CM, Spann KM, Walker PJ
2000
Loading additional literature...
Geographic Distribution
No geographic distribution data available
Taxonomy Information
Family
Picornavirales
Host Phylum
Arthropoda
Genome Type
ssRNA
Discovery Method
metagenomic_survey
Related Isolates
| Accession | Length | GC | Completeness | Country | Year |
|---|---|---|---|---|---|
| BK070343 | N/A | N/A | metadata_only | N/A | N/A |